RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SMPDL3AQ92484 453 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 HOXB13Q92826 284 aaPredicted RBP7.29□□□□□ -1.24
SNX13-208ENST00000482558 FGF13Q92913 245 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 NEIL2Q969S2 332 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 DACH2Q96NX9 599 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 OR4K3Q96R72 315 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 MTERF1Q99551 399 aaKnown RBP7.29□□□□□ -1.24
SNX13-208ENST00000482558 APOL4Q9BPW4 351 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 AIF1LQ9BQI0 150 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 TBCDQ9BTW9 1192 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 TEX12Q9BXU0 123 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 OR52A5Q9H2C5 316 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 RHBGQ9H310 441 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 TMEM38AQ9H6F2 299 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 OPA3Q9H6K4 179 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 CCNB1IP1Q9NPC3 277 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 FAM118AQ9NWS6 357 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 AKAP7Q9P0M2 348 aaPredicted RBP7.29□□□□□ -1.24
SNX13-208ENST00000482558 ZNF624Q9P2J8 865 aaPredicted RBP7.29□□□□□ -1.24
SNX13-208ENST00000482558 ATXN10Q9UBB4 475 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 LAMP5Q9UJQ1 280 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 ADAM29Q9UKF5 820 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 CDH7Q9ULB5 785 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 SCML1Q9UN30 329 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 ICKQ9UPZ9 632 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 KLHL20Q9Y2M5 609 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 DENND4AQ7Z401 1863 aa7.29□□□□□ -1.24
SNX13-208ENST00000482558 CENPFP49454 3210 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 LOC100130705A0A1B0GUX0 176 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 PIPSLA2A3N6 862 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 TMEM202A6NGA9 273 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ANKDD1BA6NHY2 528 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 GABRR3A8MPY1 467 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ADAMDEC1O15204 470 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 SUV39H1O43463 412 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 PRAMEF4O60810 478 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 JRKO75564 520 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 SNX4O95219 450 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 LRATO95237 230 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 KAT7O95251 611 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 CPSF4O95639 269 aaKnown RBP7.28□□□□□ -1.24
SNX13-208ENST00000482558 CPNE6O95741 557 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 HEXBP07686 556 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ZNF8P17098 575 aaPredicted RBP7.28□□□□□ -1.24
SNX13-208ENST00000482558 PDHA2P29803 388 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 DCTP40126 519 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 P2RY2P41231 377 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 VIPR2P41587 438 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 BDKRB1P46663 353 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 SLC6A9P48067 706 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 CCR8P51685 355 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 TMBIM6P55061 237 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ITGA1P56199 1179 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 RPS13P62277 151 aaKnown RBP7.28□□□□□ -1.24
SNX13-208ENST00000482558 C17orf67Q0P5P2 114 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 CBX3Q13185 183 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ENPP2Q13822 863 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 DDX39BQ13838 428 aaKnown RBP7.28□□□□□ -1.24
SNX13-208ENST00000482558 HEPACAMQ14CZ8 416 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 RGNQ15493 299 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ZNF630Q2M218 657 aaPredicted RBP7.28□□□□□ -1.24
SNX13-208ENST00000482558 BTBD16Q32M84 506 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 METRNLQ641Q3 311 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 KIAA1161Q6NSJ0 714 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 CES5AQ6NT32 575 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 C16orf87Q6PH81 154 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ENPP6Q6UWR7 440 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 FAM92BQ6ZTR7 304 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 CCDC80Q76M96 950 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 HORMAD1Q86X24 394 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 FRMD1Q8N878 549 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ZBTB44Q8NCP5 570 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 PIK3C3Q8NEB9 887 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ABHD11Q8NFV4 315 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 OR7A2PQ8NGA2 310 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 OR52N2Q8NGI0 321 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 OR5K2Q8NHB8 316 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ZCCHC10Q8TBK6 192 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ZFP90Q8TF47 636 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 TFGQ92734 400 aaPredicted RBP7.28□□□□□ -1.24
SNX13-208ENST00000482558 ELSPBP1Q96BH3 223 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 PPCDCQ96CD2 204 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 LRRC3BQ96PB8 259 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 EPYCQ99645 322 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 DOK1Q99704 481 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 TIMM29Q9BSF4 260 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 INPP5KQ9BT40 448 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 SPXQ9BT56 116 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 TEX101Q9BY14 249 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 TOR3AQ9H497 397 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 IKZF5Q9H5V7 419 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 REEP1Q9H902 201 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ZDHHC4Q9NPG8 344 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 PRSS16Q9NQE7 514 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 PHPT1Q9NRX4 125 aaPredicted RBP7.28□□□□□ -1.24
SNX13-208ENST00000482558 ZSCAN32Q9NX65 697 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 GALNT8Q9NY28 637 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 ZDHHC8Q9ULC8 765 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 FZD4Q9ULV1 537 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 FAF1Q9UNN5 650 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms