RNA–Protein interactions for RNA: ENST00000482278.5

TUBGCP2-208, Transcript of tubulin gamma complex associated protein 2, human

TSL 2

Gene TUBGCP2, Length 3,553 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBGCP2-208	ENST00000482278	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.13	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	FBLIM1	Q8WUP2	373 aa		11.13	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	ST8SIA4	Q92187	359 aa		11.13	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	DNASE1L2	Q92874	299 aa		11.13	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	RAB7B	Q96AH8	199 aa		11.13	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	WAC	Q9BTA9	647 aa		11.13	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	TRMT61B	Q9BVS5	477 aa	Known RBP	11.13	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	IFT46	Q9NQC8	304 aa		11.13	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	PCDHGA6	Q9Y5G7	932 aa		11.13	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	SCN2A	Q99250	2005 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	TTLL8	A6PVC2	850 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	POM121C	A8CG34	1229 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	C4orf51	C9J302	202 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	RECK	O95980	971 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	BCHE	P06276	602 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	IDH2	P48735	452 aa	Known RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	AP2S1	P53680	142 aa	Predicted RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	MANF	P55145	182 aa	Known RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	SRP54	P61011	504 aa	Known RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	FAP	Q12884	760 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	PDZK1	Q5T2W1	519 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	C10orf62	Q5T681	223 aa	Predicted RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	UBE3D	Q7Z6J8	389 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	GLCCI1	Q86VQ1	547 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	KRT78	Q8N1N4	520 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	MS4A8	Q9BY19	250 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	RACGAP1	Q9H0H5	632 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	RSPH9	Q9H1X1	276 aa	Predicted RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	OBP2A	Q9NY56	170 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	TRBV23OR9-2	A0A075B6M9	112 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	LRRC72	A6NJI9	287 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	ZNF98	A6NK75	572 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278		K7EQS6	105 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	SNX4	O95219	450 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	C21orf33	P30042	268 aa	Predicted RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	SLC35A2	P78381	396 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	ATAT1	Q5SQI0	421 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	RBM45	Q8IUH3	476 aa	Known RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	P3H2	Q8IVL5	708 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	UBQLNL	Q8IYU4	475 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	OR10G2	Q8NGC3	310 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	OR5D16	Q8NGK9	328 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	SETD7	Q8WTS6	366 aa	Known RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	GIMAP1	Q8WWP7	306 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	MLX	Q9UH92	298 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	CORO2B	Q9UQ03	480 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	RNF6	Q9Y252	685 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	PADI2	Q9Y2J8	665 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	DENND4A	Q7Z401	1863 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	OR5F1	O95221	314 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	PPIB	P23284	216 aa	Known RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	GABARAPL2	P60520	117 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	C19orf57	Q0VDD7	668 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	TEAD4	Q15561	434 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	IFI44L	Q53G44	452 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	YIF1B	Q5BJH7	314 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	LINC00518	Q8N0U6	118 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	TEFM	Q96QE5	360 aa	Known RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	ZNF300	Q96RE9	604 aa	Predicted RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	APOL4	Q9BPW4	351 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	YIPF4	Q9BSR8	244 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	ANKRA2	Q9H9E1	313 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	PCDHGB3	Q9Y5G1	929 aa		11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.12	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	TRIM77	I1YAP6	450 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	SLITRK5	O94991	958 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	APOC3	P02656	99 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	CD72	P21854	359 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	SNRPN	P63162	240 aa	Known RBP	11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	DEFA5	Q01523	94 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	KEAP1	Q14145	624 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	LEXM	Q3ZCV2	418 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	KLHL12	Q53G59	568 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	ANKRD54	Q6NXT1	300 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	FAM131A	Q6UXB0	335 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	LGI4	Q8N135	537 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	KIAA1958	Q8N8K9	716 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	UTP15	Q8TED0	518 aa	Known RBP	11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	TOE1	Q96GM8	510 aa	Known RBP	11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	EPYC	Q99645	322 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	KCNN2	Q9H2S1	579 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	DZANK1	Q9NVP4	752 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	ING3	Q9NXR8	418 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	HRH3	Q9Y5N1	445 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278		A0A1W2PQU0	124 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	TRBC2	A0A5B9	178 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	HRG	P04196	525 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	IGFBP1	P08833	259 aa	Predicted RBP	11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	SDHB	P21912	280 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	CCR8	P51685	355 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	SGCG	Q13326	291 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	COL19A1	Q14993	1142 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	TRIM40	Q6P9F5	258 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	ZNF793	Q6ZN11	406 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	CACTIN-AS1	Q8N1I8	211 aa		11.11	□□□□□ -0.63
TUBGCP2-208	ENST00000482278	SLC38A5	Q8WUX1	472 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms