RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 GLI4P10075 376 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 CPA3P15088 417 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 RPL3P39023 403 aaKnown RBP10.48□□□□□ -0.73
CCM2-213ENST00000480658 PNLIPRP2P54317 469 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 NAGLUP54802 743 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 IFFO1Q0D2I5 559 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 GANABQ14697 944 aaKnown RBP10.48□□□□□ -0.73
CCM2-213ENST00000480658 FAM153CQ494X1 144 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 RPS27LQ71UM5 84 aaKnown RBP10.48□□□□□ -0.73
CCM2-213ENST00000480658 ULK2Q8IYT8 1036 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 KIRREL3Q8IZU9 778 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 ADCY4Q8NFM4 1077 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 ZFP28Q8NHY6 868 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 C16orf78Q8WTQ4 265 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 EXOSC8Q96B26 276 aaKnown RBP10.48□□□□□ -0.73
CCM2-213ENST00000480658 HBEGFQ99075 208 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 Q9N2J8 555 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 EXO1Q9UQ84 846 aaKnown RBP10.48□□□□□ -0.73
CCM2-213ENST00000480658 GPR55Q9Y2T6 319 aaPredicted RBP10.48□□□□□ -0.73
CCM2-213ENST00000480658 MRPS18CQ9Y3D5 142 aaKnown RBP10.48□□□□□ -0.73
CCM2-213ENST00000480658 OR10H1Q9Y4A9 318 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 FAM215AQ9Y5M1 114 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 CRYBG3Q68DQ2 2970 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 CD8B2A6NJW9 211 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 FAM90A27PA6NNH2 459 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 PLOD2O00469 737 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 TOXO94900 526 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 SOX30O94993 753 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 SNUPNO95149 360 aaKnown RBP10.47□□□□□ -0.73
CCM2-213ENST00000480658 CELA3AP09093 270 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 NUDT17P0C025 328 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 RFPL3SP0C7P2 107 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 PRF1P14222 555 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 ENDOUP21128 410 aaKnown RBP10.47□□□□□ -0.73
CCM2-213ENST00000480658 CHMP24386 653 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 MAPK1P28482 360 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 PTPN6P29350 595 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 OPRM1P35372 400 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 ASMTP46597 345 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 EMDP50402 254 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 ASCL1P50553 236 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 HMGCS1Q01581 520 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 TLE4Q04727 773 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 TFF3Q07654 80 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 CRYZQ08257 329 aaKnown RBP10.47□□□□□ -0.73
CCM2-213ENST00000480658 MGAT2Q10469 447 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 CYP27C1Q4G0S4 372 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 ACSF3Q4G176 576 aaPredicted RBP10.47□□□□□ -0.73
CCM2-213ENST00000480658 VASNQ6EMK4 673 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 EMBQ6PCB8 327 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 ANGPTL8Q6UXH0 198 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 IFNEQ86WN2 208 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 KIF18BQ86Y91 864 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 DMRTC2Q8IXT2 367 aaPredicted RBP10.47□□□□□ -0.73
CCM2-213ENST00000480658 CCDC116Q8IYX3 515 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 NATD1Q8N6N6 113 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 OR9A2Q8NGT5 310 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 GOT1L1Q8NHS2 421 aaPredicted RBP10.47□□□□□ -0.73
CCM2-213ENST00000480658 NTNG2Q96CW9 530 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 APOPT1Q96IL0 206 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 VSTM2LQ96N03 204 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 TM9SF2Q99805 663 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 ZNF559Q9BR84 538 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 ROPN1BQ9BZX4 212 aaPredicted RBP10.47□□□□□ -0.73
CCM2-213ENST00000480658 SLC6A15Q9H2J7 730 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 EPB41L4BQ9H329 900 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 CALHM2Q9HA72 323 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 ROPN1Q9HAT0 212 aaPredicted RBP10.47□□□□□ -0.73
CCM2-213ENST00000480658 PROK2Q9HC23 129 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 DDX18Q9NVP1 670 aaKnown RBP10.47□□□□□ -0.73
CCM2-213ENST00000480658 ALKBH4Q9NXW9 302 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 SPRR3Q9UBC9 169 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 STOML1Q9UBI4 398 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 WIF1Q9Y5W5 379 aa10.47□□□□□ -0.73
CCM2-213ENST00000480658 ITPR2Q14571 2701 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 A0A0G2JNJ9 132 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 MYO1GB0I1T2 1018 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 TMEM114B3SHH9 223 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 TRIM13O60858 407 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 ICOSLGO75144 302 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 REM1O75628 298 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 ZWINTO95229 277 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 HSPA4LO95757 839 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 IL18BPO95998 194 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 SNRPB2P08579 225 aaKnown RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 CYP4B1P13584 511 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 CPN1P15169 458 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 PCSK2P16519 638 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 SRD5A2P31213 254 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 KIR3DL1P43629 444 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 SLCO1A2P46721 670 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 NCBP2P52298 156 aaKnown RBP eCLIP10.46□□□□□ -0.73
CCM2-213ENST00000480658 EEFSECP57772 596 aaKnown RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 RAE1P78406 368 aaKnown RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 MRPS35P82673 323 aaKnown RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 SLC18A2Q05940 514 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 C2orf80Q0P641 193 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 ZNF155Q12901 538 aaPredicted RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 EXOSC7Q15024 291 aaKnown RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 DECR1Q16698 335 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms