RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 SPRR3Q9UBC9 169 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 CCL27Q9Y4X3 112 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 POLR3HQ9Y535 204 aaPredicted RBP13.76□□□□□ -0.21
TDP2-205ENST00000480495 ZNF407Q9C0G0 2248 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 EML6Q6ZMW3 1958 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 FAM47E-STBD1D6RA91 191 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 NPHS1O60500 1241 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 ABCB7O75027 752 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 SEC22BO75396 215 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 ENDOUP21128 410 aaKnown RBP13.75□□□□□ -0.21
TDP2-205ENST00000480495 ELAVL4P26378 380 aaKnown RBP13.75□□□□□ -0.21
TDP2-205ENST00000480495 NTSP30990 170 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 CDK9P50750 372 aaKnown RBP13.75□□□□□ -0.21
TDP2-205ENST00000480495 NUP107P57740 925 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 KIAA0040Q15053 153 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 FNDC7Q5VTL7 733 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 TIGD3Q6B0B8 471 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 RPRMLQ8N4K4 120 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 VSTM2LQ96N03 204 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 FAM111AQ96PZ2 611 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 TTYH2Q9BSA4 534 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 SLC6A15Q9H2J7 730 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 UBQLN3Q9H347 655 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 C1orf109Q9NX04 203 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 TAS2R9Q9NYW1 312 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 TNFRSF10DQ9UBN6 386 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 RNF6Q9Y252 685 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 C15orf41Q9Y2V0 281 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 CACNA1DQ01668 2161 aa13.75□□□□□ -0.21
TDP2-205ENST00000480495 A0A087WV62 115 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 OR6C70A6NIJ9 312 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 C19orf84I3L1E1 186 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 COQ9O75208 318 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 UGT2B11O75310 529 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 ERN1O75460 977 aaKnown RBP13.74□□□□□ -0.21
TDP2-205ENST00000480495 TRAPPC6AO75865 159 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 HPNP05981 417 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 CT45A8P0DMV1 189 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 CT45A9P0DMV2 189 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 PRF1P14222 555 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 ALDH3A1P30838 453 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 KRT20P35900 424 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 TRPC1P48995 793 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 NCBP2P52298 156 aaKnown RBP eCLIP13.74□□□□□ -0.217e-8■□□□□ 10.2
TDP2-205ENST00000480495 CT45A2Q5DJT8 189 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 C1orf185Q5T7R7 199 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 GDF7Q7Z4P5 450 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 MREGQ8N565 214 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 OR7G2Q8NG99 324 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 OR1J4Q8NGS1 313 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 TMCO6Q96DC7 493 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 SLC35A4Q96G79 324 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 COL21A1Q96P44 957 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 GNRHR2Q96P88 292 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 NODALQ96S42 347 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 SPOCK3Q9BQ16 436 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 TMEM109Q9BVC6 243 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 OSBPL11Q9BXB4 747 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 ANKRA2Q9H9E1 313 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 FOLH1BQ9HBA9 442 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 LRTM1Q9HBL6 345 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 EML4Q9HC35 981 aaKnown RBP13.74□□□□□ -0.21
TDP2-205ENST00000480495 FAM215AQ9Y5M1 114 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 DNAJC13O75165 2243 aa13.74□□□□□ -0.21
TDP2-205ENST00000480495 C15orf38-AP3S2A0A0A6YYH1 394 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 PRAMEF25A6NGN4 478 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 PLOD2O00469 737 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 ICOSLGO75144 302 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 SPAG7O75391 227 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 REM1O75628 298 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 JUNP05412 331 aaKnown RBP13.73□□□□□ -0.21
TDP2-205ENST00000480495 SNRPB2P08579 225 aaKnown RBP13.73□□□□□ -0.21
TDP2-205ENST00000480495 FGF4P08620 206 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 IFI6P09912 130 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 GLI4P10075 376 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 SERPINB5P36952 375 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 KIR3DL1P43629 444 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 EFR3AQ14156 821 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 KANK2Q63ZY3 851 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 RTL6Q6ICC9 239 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 ANGPTL8Q6UXH0 198 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 Q6ZSR9 355 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 PM20D2Q8IYS1 436 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 CLYBLQ8N0X4 340 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 ACBD4Q8NC06 268 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 OR10Q1Q8NGQ4 319 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 TCP10LQ8TDR4 215 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 TMBIM1Q969X1 311 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 DTNBP1Q96EV8 351 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 ZNF764Q96H86 408 aaPredicted RBP13.73□□□□□ -0.21
TDP2-205ENST00000480495 FCRL1Q96LA6 429 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 AMDHD1Q96NU7 426 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 CCT7Q99832 543 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 ENKD1Q9H0I2 346 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 KCNJ16Q9NPI9 418 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 ALKBH4Q9NXW9 302 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 KLRF1Q9NZS2 232 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 SLC17A7Q9P2U7 560 aa13.73□□□□□ -0.21
TDP2-205ENST00000480495 C19orf53Q9UNZ5 99 aaPredicted RBP13.73□□□□□ -0.21
TDP2-205ENST00000480495 EXO1Q9UQ84 846 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms