RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ANKRD28O15084 1053 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 AKAP10O43572 662 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 ERN1O75460 977 aaKnown RBP14.24□□□□□ -0.13
C9orf3-217ENST00000479161 PPM1BO75688 479 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 GLSO94925 669 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-217ENST00000479161 SNX4O95219 450 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 MEOX1P50221 254 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 ALDH6A1Q02252 535 aaKnown RBP14.24□□□□□ -0.13
C9orf3-217ENST00000479161 ELOAQ14241 798 aaKnown RBP14.24□□□□□ -0.13
C9orf3-217ENST00000479161 LSM12Q3MHD2 195 aaKnown RBP14.24□□□□□ -0.13
C9orf3-217ENST00000479161 CYP27C1Q4G0S4 372 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 TMEM64Q6YI46 380 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 SLC34A3Q8N130 599 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 SIMC1Q8NDZ2 872 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 OR5P2Q8WZ92 322 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 GFM2Q969S9 779 aaKnown RBP14.24□□□□□ -0.13
C9orf3-217ENST00000479161 SLC35A4Q96G79 324 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 GPR137Q96N19 417 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 LMF2Q9BU23 707 aaKnown RBP14.24□□□□□ -0.13
C9orf3-217ENST00000479161 C1orf50Q9BV19 199 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 ITPAQ9BY32 194 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 FOLH1BQ9HBA9 442 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 C3orf14Q9HBI5 128 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 NEUROD4Q9HD90 331 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 PLSCR2Q9NRY7 297 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 DEPPQ9NTK1 212 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 DDX18Q9NVP1 670 aaKnown RBP14.24□□□□□ -0.13
C9orf3-217ENST00000479161 ZNF446Q9NWS9 450 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 GIN1Q9NXP7 522 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 QPCTLQ9NXS2 382 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 GIMAP2Q9UG22 337 aa14.24□□□□□ -0.13
C9orf3-217ENST00000479161 CNOT11Q9UKZ1 510 aaKnown RBP14.24□□□□□ -0.13
C9orf3-217ENST00000479161 LRATO95237 230 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 ABCB1P08183 1280 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-217ENST00000479161 STSP08842 583 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 CCL3P10147 92 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 LAMP1P11279 417 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 ZNF24P17028 368 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 GNLYP22749 145 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 MST1P26927 711 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 MC3RP41968 323 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 CLNS1AP54105 237 aaKnown RBP14.23□□□□□ -0.13
C9orf3-217ENST00000479161 PNLIPRP2P54317 469 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 DIO3P55073 304 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 IRX1P78414 480 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-217ENST00000479161 MRPS22P82650 360 aaKnown RBP14.23□□□□□ -0.13
C9orf3-217ENST00000479161 PSG6Q00889 435 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 FOXO1Q12778 655 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 TMEM107Q6UX40 140 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 ZNF551Q7Z340 670 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-217ENST00000479161 CPSF7Q8N684 471 aaKnown RBP14.23□□□□□ -0.13
C9orf3-217ENST00000479161 CLHC1Q8NHS4 586 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 SPPL2AQ8TCT8 520 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 RNF138Q8WVD3 245 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 CKAP2Q8WWK9 683 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 CIDECQ96AQ7 238 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-217ENST00000479161 MOAP1Q96BY2 351 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 MAGEB18Q96M61 343 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 ANGPTL4Q9BY76 406 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 ZDHHC11Q9H8X9 412 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 IL1RL2Q9HB29 575 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 PROK2Q9HC23 129 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 SEC14L3Q9UDX4 400 aa14.23□□□□□ -0.13
C9orf3-217ENST00000479161 DIDO1Q9BTC0 2240 aaKnown RBP14.23□□□□□ -0.13
C9orf3-217ENST00000479161 A0A1W2PRB8 838 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 ACOT7O00154 380 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 RNASET2O00584 256 aaKnown RBP14.22□□□□□ -0.13
C9orf3-217ENST00000479161 EMC8O43402 210 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 ASNA1O43681 348 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 TSPAN2O60636 221 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 MRPL19P49406 292 aaKnown RBP14.22□□□□□ -0.13
C9orf3-217ENST00000479161 ST13P50502 369 aaKnown RBP14.22□□□□□ -0.13
C9orf3-217ENST00000479161 PRR5P85299 388 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 RBPJQ06330 500 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 LRRC74AQ0VAA2 488 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 EFR3AQ14156 821 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 ZNHIT3Q15649 155 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-217ENST00000479161 VPS26BQ4G0F5 336 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 EXOSC6Q5RKV6 272 aaKnown RBP14.22□□□□□ -0.13
C9orf3-217ENST00000479161 FAM47EQ6ZV65 393 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 SLC22A16Q86VW1 577 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 CDRT4Q8N9R6 151 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 GLB1L3Q8NCI6 653 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-217ENST00000479161 OR7A2PQ8NGA2 310 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 OR10G3Q8NGC4 313 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 DUSP26Q9BV47 211 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 DPY30Q9C005 99 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 MED4Q9NPJ6 270 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 AIG1Q9NVV5 245 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 MRTO4Q9UKD2 239 aaKnown RBP14.22□□□□□ -0.13
C9orf3-217ENST00000479161 ZNF835Q9Y2P0 537 aa14.22□□□□□ -0.13
C9orf3-217ENST00000479161 FREM3P0C091 2139 aa14.21□□□□□ -0.13
C9orf3-217ENST00000479161 TRIM3O75382 744 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-217ENST00000479161 IDO1P14902 403 aa14.21□□□□□ -0.13
C9orf3-217ENST00000479161 LCN1P31025 176 aa14.21□□□□□ -0.13
C9orf3-217ENST00000479161 PTGER1P34995 402 aa14.21□□□□□ -0.13
C9orf3-217ENST00000479161 GPC1P35052 558 aa14.21□□□□□ -0.13
C9orf3-217ENST00000479161 CASP3P42574 277 aa14.21□□□□□ -0.13
C9orf3-217ENST00000479161 PMP22Q01453 160 aa14.21□□□□□ -0.13
C9orf3-217ENST00000479161 HSPB3Q12988 150 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms