RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 LCMT1Q9UIC8 334 aa1.38□□□□□ -2.19
HPS3-205ENST00000478525 ERVK-19Q9WJR5 959 aa1.38□□□□□ -2.19
HPS3-205ENST00000478525 ZNF835Q9Y2P0 537 aa1.38□□□□□ -2.19
HPS3-205ENST00000478525 PLEKHG1Q9ULL1 1385 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 HTR3EA5X5Y0 456 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 A6NDX4 124 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 MED6O75586 246 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 CPNE6O95741 557 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 MMP1P03956 469 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 IGKV4-1P06312 121 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 IGHV4-34P06331 123 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 TPBGLP0DKB5 382 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 HTR1EP28566 365 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 EEF1DP29692 281 aaKnown RBP1.37□□□□□ -2.19
HPS3-205ENST00000478525 PUDPQ08623 228 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 DCST2Q5T1A1 773 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 LGSNQ5TDP6 509 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 CCDC186Q7Z3E2 898 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 ZNF100Q8IYN0 542 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 LINC00518Q8N0U6 118 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 ALLCQ8N6M5 410 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 ZNF615Q8N8J6 731 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 Q8N9W7 124 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 C7orf33Q8WU49 177 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 NEIL2Q969S2 332 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 COG3Q96JB2 828 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 ZNF578Q96N58 590 aaPredicted RBP1.37□□□□□ -2.19
HPS3-205ENST00000478525 CITED2Q99967 270 aaPredicted RBP1.37□□□□□ -2.19
HPS3-205ENST00000478525 PLA2G2FQ9BZM2 168 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 NMNAT2Q9BZQ4 307 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 TSPY26PQ9H489 355 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 NRN1Q9NPD7 142 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 TUBGCP4Q9UGJ1 667 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 SLC9A8Q9Y2E8 581 aa1.37□□□□□ -2.19
HPS3-205ENST00000478525 ST8SIA3O43173 380 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 BBOX1O75936 387 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 IGKV1D-16P01601 117 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 RLN1P04808 185 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 GHRP10912 638 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 CCND3P30281 292 aaPredicted RBP1.36□□□□□ -2.19
HPS3-205ENST00000478525 GP5P40197 560 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 METAP1P53582 386 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 MADCAM1Q13477 382 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 IL18R1Q13478 541 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 KLF5Q13887 457 aaPredicted RBP1.36□□□□□ -2.19
HPS3-205ENST00000478525 TCHHL1Q5QJ38 904 aaPredicted RBP1.36□□□□□ -2.19
HPS3-205ENST00000478525 CASC4Q6P4E1 433 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 PODNL1Q6PEZ8 512 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 PIWIL3Q7Z3Z3 882 aaKnown RBP1.36□□□□□ -2.19
HPS3-205ENST00000478525 PPP1R27Q86WC6 154 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 CERS5Q8N5B7 392 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.36□□□□□ -2.19
HPS3-205ENST00000478525 TAF4BQ92750 862 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 ULK4Q96C45 1275 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 FOPNLQ96NB1 174 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 FERMT1Q9BQL6 677 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 RABEP2Q9H5N1 569 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 DCTPP1Q9H773 170 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 APMAPQ9HDC9 416 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 EXOSC3Q9NQT5 275 aaKnown RBP1.36□□□□□ -2.19
HPS3-205ENST00000478525 ONECUT1Q9UBC0 465 aa1.36□□□□□ -2.19
HPS3-205ENST00000478525 A0A0U1RQS6 177 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 YJEFN3A6XGL0 299 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 YDJCA8MPS7 323 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 C11orf98E9PRG8 122 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 RIPK2O43353 540 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 INSP01308 110 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 CT45A8P0DMV1 189 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 CT45A9P0DMV2 189 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 ZNF14P17017 642 aaPredicted RBP1.35□□□□□ -2.19
HPS3-205ENST00000478525 RCC1P18754 421 aaPredicted RBP1.35□□□□□ -2.19
HPS3-205ENST00000478525 HOXD10P28358 340 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 TNFSF10P50591 281 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 CAPZA1P52907 286 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 RAD23AP54725 363 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 RPL32P62910 135 aaKnown RBP1.35□□□□□ -2.19
HPS3-205ENST00000478525 OTUD4Q01804 1114 aaKnown RBP1.35□□□□□ -2.19
HPS3-205ENST00000478525 SLAQ13239 276 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 UNC119Q13432 240 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 CT45A2Q5DJT8 189 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 FAM71E1Q6IPT2 247 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 SPATA19Q7Z5L4 167 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 AQP12AQ8IXF9 295 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 UBTD2Q8WUN7 234 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 ANKRD49Q8WVL7 239 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 NOL4LQ96MY1 436 aaPredicted RBP1.35□□□□□ -2.19
HPS3-205ENST00000478525 CPXM1Q96SM3 734 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 CHMP4AQ9BY43 222 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 ZNF225Q9UK10 706 aa1.35□□□□□ -2.19
HPS3-205ENST00000478525 MRTO4Q9UKD2 239 aaKnown RBP1.35□□□□□ -2.19
HPS3-205ENST00000478525 A0A0J9YXY3 114 aa1.34□□□□□ -2.19
HPS3-205ENST00000478525 ZSCAN5BA6NJL1 495 aa1.34□□□□□ -2.19
HPS3-205ENST00000478525 NBR2O15453 112 aa1.34□□□□□ -2.19
HPS3-205ENST00000478525 RANBP6O60518 1105 aaKnown RBP1.34□□□□□ -2.19
HPS3-205ENST00000478525 TBL1XO60907 577 aa1.34□□□□□ -2.19
HPS3-205ENST00000478525 NPIPB7O75200 414 aa1.34□□□□□ -2.19
HPS3-205ENST00000478525 ZFYP08048 801 aaPredicted RBP1.34□□□□□ -2.19
HPS3-205ENST00000478525 RPS4XP62701 263 aaKnown RBP1.34□□□□□ -2.19
HPS3-205ENST00000478525 CDKL1Q00532 357 aa1.34□□□□□ -2.19
HPS3-205ENST00000478525 OC90Q02509 493 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms