RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 ACSL4O60488 711 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 CELF2O95319 508 aaKnown RBP-0.02□□□□□ -2.41
CALD1-218ENST00000478075 GLAP06280 429 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 STSP08842 583 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 NPY1RP25929 384 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 METAP1P53582 386 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 CSE1LP55060 971 aaKnown RBP-0.02□□□□□ -2.41
CALD1-218ENST00000478075 NOP14P78316 857 aaKnown RBP-0.02□□□□□ -2.41
CALD1-218ENST00000478075 MC1RQ01726 317 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 ABRQ12979 859 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 G3BP1Q13283 466 aaKnown RBP eCLIP-0.02□□□□□ -2.41
CALD1-218ENST00000478075 MEF2DQ14814 521 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 COX19Q49B96 90 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 DCAF12Q5T6F0 453 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 FAM46CQ5VWP2 391 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 OR5M10Q6IEU7 315 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 SHISA6Q6ZSJ9 500 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 PRSS48Q7RTY5 328 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 DNAAF5Q86Y56 855 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 NAXEQ8NCW5 288 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 OR6J1Q8NGC5 347 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 C5orf30Q96GV9 206 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 LZTS2Q9BRK4 669 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 EXOSC3Q9NQT5 275 aaKnown RBP-0.02□□□□□ -2.41
CALD1-218ENST00000478075 PDRG1Q9NUG6 133 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 NOCTQ9UK39 431 aaKnown RBP-0.02□□□□□ -2.41
CALD1-218ENST00000478075 EMCNQ9ULC0 261 aa-0.02□□□□□ -2.41
CALD1-218ENST00000478075 CHTOPQ9Y3Y2 248 aaKnown RBP-0.02□□□□□ -2.41
CALD1-218ENST00000478075 ADGRL1O94910 1474 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 FGD5Q6ZNL6 1462 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 SEC16AO15027 2179 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 A0A1B0GW55 424 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 C7orf66A4D0T2 115 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 RBMY1BA6NDE4 496 aaKnown RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 RBMY1EA6NEQ0 496 aaKnown RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 DHRS7CA6NNS2 312 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 C11orf94C9JXX5 98 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 FLRT2O43155 660 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 PPIP5K2O43314 1243 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 TSPAN2O60636 221 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 PEX14O75381 377 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 IGHV3-48P01763 117 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 ABCB1P08183 1280 aaPredicted RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 RBMY1DP0C7P1 496 aaKnown RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 DUX4L2P0CJ85 424 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 DUX4L3P0CJ86 424 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 DUX4L5P0CJ88 424 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 DUX4L6P0CJ89 424 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 DUX4L7P0CJ90 424 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 SPP1P10451 314 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 PRDX3P30048 256 aaKnown RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 BTDP43251 543 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 MAGEB1P43366 347 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 EPS8Q12929 822 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 SLC39A6Q13433 755 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 IRF4Q15306 451 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 CDKN3Q16667 212 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 ARMC4Q5T2S8 1044 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 DUX4L9Q6RFH8 374 aaPredicted RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 SMAP1Q8IYB5 467 aaPredicted RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 PIGCQ92535 297 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 TVP23CQ96ET8 276 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 RSRC1Q96IZ7 334 aaKnown RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 PPM1MQ96MI6 270 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 COQ7Q99807 217 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 GPR174Q9BXC1 333 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 ZDHHC11Q9H8X9 412 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 SH2D2AQ9NP31 389 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 NANSQ9NR45 359 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 MRPL15Q9P015 296 aaKnown RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 C6orf203Q9P0P8 240 aaPredicted RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 DUX4Q9UBX2 424 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 NUFIP1Q9UHK0 495 aaKnown RBP-0.03□□□□□ -2.41
CALD1-218ENST00000478075 ANAPC2Q9UJX6 822 aa-0.03□□□□□ -2.41
CALD1-218ENST00000478075 MAP3K15Q6ZN16 1313 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 A0A0A6YYD4 124 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 KLF8O95600 359 aaPredicted RBP-0.04□□□□□ -2.42
CALD1-218ENST00000478075 PCCBP05166 539 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 PSMA3P25788 255 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 NF2P35240 595 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 NSFP46459 744 aaKnown RBP-0.04□□□□□ -2.42
CALD1-218ENST00000478075 APOC4P55056 127 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 PSMC6P62333 389 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 PUDPQ08623 228 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 PSMD6Q15008 389 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 P2RY14Q15391 338 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 UBE2SQ16763 222 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 LRRC36Q1X8D7 754 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 LRRC73Q5JTD7 316 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 LGSNQ5TDP6 509 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 MEDAGQ5VYS4 303 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 NANOGP8Q6NSW7 305 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 Q6ZR03 302 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 Q6ZRG5 221 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 CYP4V2Q6ZWL3 525 aaPredicted RBP-0.04□□□□□ -2.42
CALD1-218ENST00000478075 C12orf56Q8IXR9 622 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 ZNF444Q8N0Y2 327 aaPredicted RBP-0.04□□□□□ -2.42
CALD1-218ENST00000478075 CCDC197Q8NCU1 140 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 OR9A1PQ8NGU1 263 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 RAET1EQ8TD07 263 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms