RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 SNX32Q86XE0 403 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 POU5F2Q8N7G0 328 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 ANKS4BQ8N8V4 417 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 CCDC197Q8NCU1 140 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 OR8K3Q8NH51 312 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 GOT1L1Q8NHS2 421 aaPredicted RBP10.61□□□□□ -0.71
CBWD3-206ENST00000478048 ADIPOR1Q96A54 375 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 ERP27Q96DN0 273 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 GIMAP5Q96F15 307 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 OTUB1Q96FW1 271 aaPredicted RBP10.61□□□□□ -0.71
CBWD3-206ENST00000478048 C16orf58Q96GQ5 468 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 C3orf14Q9HBI5 128 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 EQTNQ9NQ60 294 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 NTMQ9P121 344 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 HEMK1Q9Y5R4 338 aaPredicted RBP10.61□□□□□ -0.71
CBWD3-206ENST00000478048 CPAMD8Q8IZJ3 1885 aa10.61□□□□□ -0.71
CBWD3-206ENST00000478048 BSNQ9UPA5 3926 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 OR6C76A6NM76 312 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 K7EM74 188 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 RFXANKO14593 260 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 BCAS2O75934 225 aaPredicted RBP10.6□□□□□ -0.71
CBWD3-206ENST00000478048 IFI6P09912 130 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 FAM87AP0C7U9 286 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 PTPN6P29350 595 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 ADSLP30566 484 aaPredicted RBP10.6□□□□□ -0.71
CBWD3-206ENST00000478048 SOX11P35716 441 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 CASP9P55211 416 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 CORO7P57737 925 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 TP53BP2Q13625 1128 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 SPDYE7PQ495Y7 208 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 TMEM64Q6YI46 380 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 LINC00696Q6ZRV3 163 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 ZNF621Q6ZSS3 439 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 SLC29A4Q7RTT9 530 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 ZNF441Q8N8Z8 693 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 NUBPLQ8TB37 319 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 FBXO30Q8TB52 745 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 TTC9Q92623 222 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 ITCHQ96J02 903 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 VSTM2LQ96N03 204 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 YIPF4Q9BSR8 244 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 PAIP1Q9H074 479 aaKnown RBP10.6□□□□□ -0.71
CBWD3-206ENST00000478048 RMND5AQ9H871 391 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 FOLH1BQ9HBA9 442 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 MRGBPQ9NV56 204 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.6□□□□□ -0.71
CBWD3-206ENST00000478048 GPATCH2Q9NW75 528 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 MYOTQ9UBF9 498 aa10.6□□□□□ -0.71
CBWD3-206ENST00000478048 LEF1Q9UJU2 399 aaPredicted RBP10.6□□□□□ -0.71
CBWD3-206ENST00000478048 RNF103-CHMP3A0A140T963 221 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 C2orf92A0A1B0GVN3 265 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 CAPN14A8MX76 684 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 SLC22A2O15244 555 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 COQ9O75208 318 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 OR2J2O76002 312 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 F10P00742 488 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 PDGFAP04085 211 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 HMGN2P05204 90 aaKnown RBP10.59□□□□□ -0.71
CBWD3-206ENST00000478048 HOXB9P17482 250 aaPredicted RBP10.59□□□□□ -0.71
CBWD3-206ENST00000478048 UQCRC2P22695 453 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 NR0B1P51843 470 aaKnown RBP10.59□□□□□ -0.71
CBWD3-206ENST00000478048 MLF1P58340 268 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 RPS26P62854 115 aaKnown RBP10.59□□□□□ -0.71
CBWD3-206ENST00000478048 AP2B1P63010 937 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 CBX1P83916 185 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 PRR5P85299 388 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 ZNF155Q12901 538 aaPredicted RBP10.59□□□□□ -0.71
CBWD3-206ENST00000478048 LASP1Q14847 261 aaKnown RBP10.59□□□□□ -0.71
CBWD3-206ENST00000478048 ACER2Q5QJU3 275 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 AGAP7PQ5VUJ5 663 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 IRAK1BP1Q5VVH5 260 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 NPSR1Q6W5P4 371 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 MSRB3Q8IXL7 192 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 BEST3Q8N1M1 668 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 SLC5A8Q8N695 610 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 FITM2Q8N6M3 262 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 OR5L2Q8NGL0 311 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 SFXN5Q8TD22 340 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 TSPEARQ8WU66 669 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 AURKBQ96GD4 344 aaPredicted RBP10.59□□□□□ -0.71
CBWD3-206ENST00000478048 ABHD17AQ96GS6 310 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 AGAP4Q96P64 663 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 MS4A4EQ96PG1 132 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 LRRC37BQ96QE4 947 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 LMF1Q96S06 567 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 SLC35A5Q9BS91 424 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 SLC25A23Q9BV35 468 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 NXF5Q9H1B4 397 aaKnown RBP10.59□□□□□ -0.71
CBWD3-206ENST00000478048 SERHL2Q9H4I8 314 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 SLC25A37Q9NYZ2 338 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 PRODH2Q9UF12 536 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 NDUFAF1Q9Y375 327 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 PCDHB14Q9Y5E9 798 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 TLN1Q9Y490 2541 aaKnown RBP10.59□□□□□ -0.71
CBWD3-206ENST00000478048 NBEAQ8NFP9 2946 aa10.59□□□□□ -0.71
CBWD3-206ENST00000478048 DYTNA2CJ06 578 aa10.58□□□□□ -0.72
CBWD3-206ENST00000478048 ANGPT2O15123 496 aa10.58□□□□□ -0.72
CBWD3-206ENST00000478048 ERN1O75460 977 aaKnown RBP10.58□□□□□ -0.72
CBWD3-206ENST00000478048 ITGA10O75578 1167 aa10.58□□□□□ -0.72
CBWD3-206ENST00000478048 DCTN3O75935 186 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms