RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ITGA3P26006 1051 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ADRA1AP35348 466 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 PTGER4P35408 488 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 CHI3L1P36222 383 aaPredicted RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 FDFT1P37268 417 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 PLA2G5P39877 138 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 STAT6P42226 847 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 GRIA3P42263 894 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 OMPP47874 163 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 PPT1P50897 306 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 MAPK12P53778 367 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 RAD23BP54727 409 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM33P57088 247 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 RBX1P62877 108 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 GPC5P78333 572 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 CCL7P80098 99 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 IL9RQ01113 521 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 COL10A1Q03692 680 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 CXCL9Q07325 125 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 FOXM1Q08050 763 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 SIGLEC14Q08ET2 396 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 RIPPLY1Q0D2K3 151 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 STX3Q13277 289 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ZNHIT3Q15649 155 aaPredicted RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 GUK1Q16774 197 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ME3Q16798 604 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 TPD52L1Q16890 204 aaPredicted RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 KIF19Q2TAC6 998 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 TRIM16LQ309B1 348 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 DPCR1Q3MIW9 517 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 GPR107Q5VW38 600 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 HACD4Q5VWC8 232 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 SLX4IPQ5VYV7 408 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 APOBEC3HQ6NTF7 200 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 H3F3CQ6NXT2 135 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ZFP1Q6P2D0 407 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 LRRN1Q6UXK5 716 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 GDPD4Q6W3E5 623 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ASCL4Q6XD76 172 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 HSDL2Q6YN16 418 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 C11orf57Q6ZUT1 292 aaPredicted RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 TFAP2DQ7Z6R9 452 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 PRUNE1Q86TP1 453 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 HPS6Q86YV9 775 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 PLD3Q8IV08 490 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 RASGRP3Q8IV61 690 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 CROCCP3Q8IVE0 287 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 FOXP4Q8IVH2 680 aaPredicted RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 TEX26Q8N6G2 289 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 CCDC185Q8N715 623 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 SYT14Q8NB59 555 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 NECAP1Q8NC96 275 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 OR10H4Q8NGA5 316 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 OR4A15Q8NGL6 344 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 OR5M8Q8NGP6 311 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 OR56A3Q8NH54 315 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 SMPDL3AQ92484 453 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 AKAP1Q92667 903 aaKnown RBP eCLIP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 GTF2H4Q92759 462 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 SMARCD2Q92925 531 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ULK4Q96C45 1275 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 CCDC124Q96CT7 223 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 AP2M1Q96CW1 435 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 NXPE2Q96DL1 559 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 TCEAL4Q96EI5 215 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 B3GALT6Q96L58 329 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ZIM3Q96PE6 472 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 DUX5Q96PT3 197 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM246Q9BRR3 403 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 C2orf88Q9BSF0 95 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM43Q9BTV4 400 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 UCK2Q9BZX2 261 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 POLR3FQ9H1D9 316 aaPredicted RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 GANQ9H2C0 597 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 DPEP2Q9H4A9 486 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 NXF3Q9H4D5 531 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 WDR76Q9H967 626 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 WDR54Q9H977 334 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 SYNPO2LQ9H987 977 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 MEAF6Q9HAF1 191 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 SGK2Q9HBY8 427 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ZNF160Q9HCG1 818 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 GBA2Q9HCG7 927 aaPredicted RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ZBTB26Q9HCK0 441 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 HHATLQ9HCP6 504 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 LYRM4Q9HD34 91 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 CTPS2Q9NRF8 586 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 GIN1Q9NXP7 522 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 COA4Q9NYJ1 87 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 HAO2Q9NYQ3 351 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 MTCH1Q9NZJ7 389 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 FOXJ2Q9P0K8 574 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 MYEF2Q9P2K5 600 aaKnown RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 BCAP29Q9UHQ4 241 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 CD207Q9UJ71 328 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ERRFI1Q9UJM3 462 aaPredicted RBP3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 MID2Q9UJV3 735 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 SERTAD3Q9UJW9 196 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 ACSL5Q9ULC5 683 aa3.29□□□□□ -1.88
FNDC3B-209ENST00000478016 NDRG4Q9ULP0 352 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms