RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ARHGEF38Q9NXL2 777 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 VPS28Q9UK41 221 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 NTNG1Q9Y2I2 539 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 ZNF106Q9H2Y7 1883 aaKnown RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 TRGV8A0A0C4DH27 118 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 CXorf51AA0A1B0GTR3 108 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 YJEFN3A6XGL0 299 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 A8MU76 341 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 E7ENQ6 273 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 XPO1O14980 1071 aaKnown RBP4.1□□□□□ -1.75
VPS50-214ENST00000477935 CLDN11O75508 207 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 SPAG6O75602 509 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 RSL1D1O76021 490 aaKnown RBP4.1□□□□□ -1.75
VPS50-214ENST00000477935 KIAA0754O94854 1291 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 APOEP02649 317 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 SLC2A3P11169 496 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 MMP9P14780 707 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 DNASE1P24855 282 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 CHRNB4P30926 498 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 HOXD13P35453 343 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 PSMB10P40306 273 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 CA7P43166 264 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 MAZP56270 477 aaKnown RBP4.1□□□□□ -1.75
VPS50-214ENST00000477935 KIAA1024LP59773 190 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 HILS1P60008 231 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 GNB1P62873 340 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 CYP24A1Q07973 514 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 PRKAA1Q13131 559 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 MEA1Q16626 185 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 KLHL40Q2TBA0 621 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 CARD16Q5EG05 197 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 GCNT6Q5T4J0 391 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 RPUSD3Q6P087 351 aaKnown RBP4.1□□□□□ -1.75
VPS50-214ENST00000477935 TMEM207Q6UWW9 146 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 SCARA5Q6ZMJ2 495 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 GPALPP1Q8IXQ4 340 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 XXYLT1Q8NBI6 393 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 C8orf76Q96K31 380 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 FER1L6-AS2Q96M78 137 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 TRIM62Q9BVG3 475 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 BARHL1Q9BZE3 327 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 HRH4Q9H3N8 390 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 OLAHQ9NV23 265 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 TAS2R14Q9NYV8 317 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 STMN3Q9NZ72 180 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 TMEM9Q9P0T7 183 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 CGNQ9P2M7 1197 aaKnown RBP4.1□□□□□ -1.75
VPS50-214ENST00000477935 AMACRQ9UHK6 382 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 LNPEPQ9UIQ6 1025 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 OR51B4Q9Y5P0 310 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 ZGRF1Q86YA3 2104 aa4.1□□□□□ -1.75
VPS50-214ENST00000477935 MYH11P35749 1972 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 ANK2Q01484 3957 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 C19orf84I3L1E1 186 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 SLC22A2O15244 555 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 SIX3O95343 332 aaPredicted RBP4.09□□□□□ -1.75
VPS50-214ENST00000477935 POP4O95707 220 aaKnown RBP4.09□□□□□ -1.75
VPS50-214ENST00000477935 ASS1P00966 412 aaKnown RBP4.09□□□□□ -1.75
VPS50-214ENST00000477935 KLK3P07288 261 aaPredicted RBP4.09□□□□□ -1.75
VPS50-214ENST00000477935 H1F0P07305 194 aaKnown RBP4.09□□□□□ -1.75
VPS50-214ENST00000477935 CD48P09326 243 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 RAB40ALP0C0E4 278 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 TRIM49P0CI25 452 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 TRIM49CP0CI26 452 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 EPHA2P29317 976 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 HNRNPH3P31942 346 aaKnown RBP4.09□□□□□ -1.75
VPS50-214ENST00000477935 SLC15A1P46059 708 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 MFAP4P55083 255 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 DAOAP59103 153 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 SNRPEP62304 92 aaKnown RBP4.09□□□□□ -1.75
VPS50-214ENST00000477935 RBPJQ06330 500 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 ELP6Q0PNE2 266 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 IRF4Q15306 451 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 WSCD2Q2TBF2 565 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 RILPL1Q5EBL4 403 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 FAM53AQ6NSI3 398 aaPredicted RBP4.09□□□□□ -1.75
VPS50-214ENST00000477935 MZT2BQ6NZ67 158 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 PODNL1Q6PEZ8 512 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 PHC2Q8IXK0 858 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 ATP6V0D2Q8N8Y2 350 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 L3MBTL4Q8NA19 623 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 CLEC1AQ8NC01 280 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 HCAR2Q8TDS4 363 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 ISG20Q96AZ6 181 aaKnown RBP4.09□□□□□ -1.75
VPS50-214ENST00000477935 SLC47A1Q96FL8 570 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 PDXPQ96GD0 296 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 CCDC34Q96HJ3 373 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 TIGD1Q96MW7 591 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 OR6C1Q96RD1 312 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 SMR3AQ99954 134 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 ZDHHC6Q9H6R6 413 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 SYNCQ9H7C4 482 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 PELI2Q9HAT8 420 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 KCNN3Q9UGI6 736 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 HMGXB4Q9UGU5 601 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 SNX7Q9UNH6 387 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 OR1A2Q9Y585 309 aa4.09□□□□□ -1.75
VPS50-214ENST00000477935 TNRC6AQ8NDV7 1962 aaKnown RBP4.09□□□□□ -1.76
VPS50-214ENST00000477935 FER1L5A0AVI2 2057 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms