RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 SLC22A4Q9H015 551 aa9.22□□□□□ -0.93
CMC1-209ENST00000477739 FBXO8Q9NRD0 319 aa9.22□□□□□ -0.93
CMC1-209ENST00000477739 TXNL4BQ9NX01 149 aaKnown RBP9.22□□□□□ -0.93
CMC1-209ENST00000477739 NLGN3Q9NZ94 848 aa9.22□□□□□ -0.93
CMC1-209ENST00000477739 AHSPQ9NZD4 102 aa9.22□□□□□ -0.93
CMC1-209ENST00000477739 GRIP1Q9Y3R0 1128 aa9.22□□□□□ -0.93
CMC1-209ENST00000477739 RPL36Q9Y3U8 105 aaKnown RBP9.22□□□□□ -0.93
CMC1-209ENST00000477739 TRPM6Q9BX84 2022 aa9.22□□□□□ -0.93
CMC1-209ENST00000477739 CHURC1-FNTBB4DL54 471 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 CAPN5O15484 640 aaPredicted RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 PTHLHP12272 177 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 MAGEB1P43366 347 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 CLDN12P56749 244 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 NDUFAF5Q5TEU4 345 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 MLIPQ5VWP3 458 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 SFRP4Q6FHJ7 346 aaPredicted RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 GRHL2Q6ISB3 625 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 TCTN3Q6NUS6 607 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 ZNF438Q7Z4V0 828 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 TSEN54Q7Z6J9 526 aaKnown RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 ELMOD2Q8IZ81 293 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 SHISA5Q8N114 240 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 VN1R2Q8NFZ6 395 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 OR9A2Q8NGT5 310 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 PIK3R3Q92569 461 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 DCLRE1CQ96SD1 692 aaKnown RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 DPH7Q9BTV6 452 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 FAIM2Q9BWQ8 316 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 KLHL31Q9H511 634 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 CCDC86Q9H6F5 360 aaKnown RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 STARD5Q9NSY2 213 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 ASIC5Q9NY37 505 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 A0A075B6Q4 140 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 FAM172BPA6NC97 362 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 AGAP14A8MT82 685 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 PRR23D1E9PI22 279 aaPredicted RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 H3BQ06 376 aaPredicted RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 I3L521 148 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 PLPP1O14494 284 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 TMPRSS11DO60235 418 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 DOK2O60496 412 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 GPR37L1O60883 481 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 ARHGEF15O94989 841 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 PRR23D2P0DMB1 279 aaPredicted RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 PPIBP23284 216 aaKnown RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 MMP11P24347 488 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 CERS1P27544 350 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 NTSP30990 170 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 HTR3AP46098 478 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 BTN3A2P78410 334 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 DHCR24Q15392 516 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 MTSS1LQ765P7 747 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 GET4Q7L5D6 327 aaPredicted RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 CHMP1BQ7LBR1 199 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 CPOQ8IVL8 374 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 OR8J2Q8NGG1 315 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 OR6K6Q8NGW6 343 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 ADAMTS15Q8TE58 950 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 SUSD6Q92537 303 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 UFD1Q92890 307 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 EPYCQ99645 322 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 C1QTNF6Q9BXI9 259 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 DPH1Q9BZG8 443 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 PPIL3Q9H2H8 161 aaKnown RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 C6orf106Q9H6K1 298 aaPredicted RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 DDX31Q9H8H2 851 aaKnown RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 ZNF224Q9NZL3 707 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 MYEF2Q9P2K5 600 aaKnown RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 TBC1D24Q9ULP9 559 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 CORO2BQ9UQ03 480 aa9.21□□□□□ -0.93
CMC1-209ENST00000477739 EXO1Q9UQ84 846 aaKnown RBP9.21□□□□□ -0.93
CMC1-209ENST00000477739 COL4A4P53420 1690 aaPredicted RBP9.21□□□□□ -0.94
CMC1-209ENST00000477739 EFCAB14O75071 495 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 PTTG1O95997 202 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 FGBP02675 491 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 HRGP04196 525 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 ADH5P11766 374 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 JUNDP17535 347 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 HOXD11P31277 338 aaPredicted RBP9.21□□□□□ -0.94
CMC1-209ENST00000477739 OR10A3P58181 314 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 CHRNEQ04844 493 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 FGFBP1Q14512 234 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 LARS2Q15031 903 aaKnown RBP9.21□□□□□ -0.94
CMC1-209ENST00000477739 DEFB134Q4QY38 66 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 CDC73Q6P1J9 531 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 NXPE4Q6UWF7 544 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 GALNT13Q8IUC8 556 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 PRSS58Q8IYP2 241 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 LILRB4Q8NHJ6 448 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 WDR20Q8TBZ3 569 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 ASB15Q8WXK1 588 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 OR8D1Q8WZ84 308 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 SMPDL3AQ92484 453 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 AIF1LQ9BQI0 150 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 MND1Q9BWT6 205 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 NUDT15Q9NV35 164 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 DEC1Q9P2X7 70 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 PPIEQ9UNP9 301 aaKnown RBP9.21□□□□□ -0.94
CMC1-209ENST00000477739 CELSR3Q9NYQ7 3312 aa9.21□□□□□ -0.94
CMC1-209ENST00000477739 IGLV3-16A0A075B6K0 115 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms