RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 FDCSPQ8NFU4 85 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 OR5L2Q8NGL0 311 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 RP9Q8TA86 221 aaKnown RBP14.19□□□□□ -0.14
SEC13-215ENST00000477547 PSMF1Q92530 271 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 RCN3Q96D15 328 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 VSTM2LQ96N03 204 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 PAIP1Q9H074 479 aaKnown RBP14.19□□□□□ -0.14
SEC13-215ENST00000477547 SLC6A13Q9NSD5 602 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 NTMQ9P121 344 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 TEKT2Q9UIF3 430 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 ERVK-11Q9UQG0 969 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 BOD1L1Q8NFC6 3051 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 LOC100653049A0A140TA62 436 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 CAPN14A8MX76 684 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 FBP2O00757 339 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 CEACAM4O75871 244 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 KRT34O76011 436 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 HMGN2P05204 90 aaKnown RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 ZCCHC18P0CG32 403 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 HOXB9P17482 250 aaPredicted RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 PTPN6P29350 595 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 PRDX6P30041 224 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 SOX11P35716 441 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 PRIM2P49643 509 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 CORO7P57737 925 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 RPS26P62854 115 aaKnown RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 ZNHIT3Q15649 155 aaPredicted RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 TRMT5Q32P41 509 aaKnown RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 COQ5Q5HYK3 327 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 LRIF1Q5T3J3 769 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 ABHD17BQ5VST6 288 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 AGAP7PQ5VUJ5 663 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 SAXO2Q658L1 398 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 H3F3CQ6NXT2 135 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 C16orf47Q6ZP98 133 aaPredicted RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 WDR53Q7Z5U6 358 aaPredicted RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 RPS19BP1Q86WX3 136 aaKnown RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 LGI4Q8N135 537 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 DPP10Q8N608 796 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 GIMAP5Q96F15 307 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 OTUB1Q96FW1 271 aaPredicted RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 AURKBQ96GD4 344 aaPredicted RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 AGAP4Q96P64 663 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 BTBD9Q96Q07 612 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 NPAS2Q99743 824 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 LIN28AQ9H9Z2 209 aaKnown RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 IL1RL2Q9HB29 575 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 ABI3Q9P2A4 366 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 FAF1Q9UNN5 650 aaPredicted RBP14.18□□□□□ -0.14
SEC13-215ENST00000477547 DOPEY2Q9Y3R5 2298 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 EML6Q6ZMW3 1958 aa14.18□□□□□ -0.14
SEC13-215ENST00000477547 FRG2CA6NGY1 282 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 TMEM200CA6NKL6 621 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 MKRN2OSH3BPM6 223 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 WWP2O00308 870 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 MAN1A2O60476 641 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 ITGA10O75578 1167 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 ALPPP05187 535 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 KRT16P08779 473 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 NR0B1P51843 470 aaKnown RBP14.17□□□□□ -0.14
SEC13-215ENST00000477547 MLF1P58340 268 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 STX5Q13190 355 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 MEP1AQ16819 746 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 ACER2Q5QJU3 275 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 ISLR2Q6UXK2 745 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 NPSR1Q6W5P4 371 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 LINC00696Q6ZRV3 163 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 MSRB3Q8IXL7 192 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 BEST3Q8N1M1 668 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 ARMC10Q8N2F6 343 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 FITM2Q8N6M3 262 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 ZNF441Q8N8Z8 693 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 EXD3Q8N9H8 876 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 CDRT4Q8N9R6 151 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 PCYOX1LQ8NBM8 494 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 C17orf47Q8NEP4 570 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 DNAJB8Q8NHS0 232 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 SLC22A8Q8TCC7 542 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 PNPT1Q8TCS8 783 aaKnown RBP14.17□□□□□ -0.14
SEC13-215ENST00000477547 SLC9A6Q92581 669 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 ADIPOR1Q96A54 375 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 CMTM5Q96DZ9 223 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 NEURL3Q96EH8 262 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 ZNF354BQ96LW1 612 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 ARHGAP9Q9BRR9 750 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 YIPF4Q9BSR8 244 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 LMF2Q9BU23 707 aaKnown RBP14.17□□□□□ -0.14
SEC13-215ENST00000477547 NXF5Q9H1B4 397 aaKnown RBP14.17□□□□□ -0.14
SEC13-215ENST00000477547 CDCP1Q9H5V8 836 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 GPATCH2Q9NW75 528 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 SLC25A37Q9NYZ2 338 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 MYOTQ9UBF9 498 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 CNTRLQ7Z7A1 2325 aa14.17□□□□□ -0.14
SEC13-215ENST00000477547 OR2J2O76002 312 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 KRT75O95678 551 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 ACP2P11117 423 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 KHKP50053 298 aa14.16□□□□□ -0.14
SEC13-215ENST00000477547 DCAF7P61962 342 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms