RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	KLHL9	Q9P2J3	617 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	NSG2	Q9Y328	171 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664		Q9Y3F1	56 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	FLNC	Q14315	2725 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	ZMYM6	O95789	1325 aa		6.23	□□□□□ -1.41
LRCH3-215	ENST00000476664	FOCAD	Q5VW36	1801 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	LOC105371242	A0A075B767	164 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	ASB14	A6NK59	587 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	NPIPA2	E9PIF3	369 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664		E9PMD0	336 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	SGK494	L7N484	410 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	TULP2	O00295	520 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	SDHD	O14521	159 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	TIMM23	O14925	209 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	NVL	O15381	856 aa	Known RBP	6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	HYAL3	O43820	417 aa	Predicted RBP	6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	CIDEA	O60543	219 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	TM7SF2	O76062	418 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	NDUFA7	O95182	113 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	CHRNA1	P02708	482 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	IVL	P07476	585 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	CKMT2	P17540	419 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	CBL	P22681	906 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	GNLY	P22749	145 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	PDE1B	Q01064	536 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	SF3A2	Q15428	464 aa	Known RBP	6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	ZNF542P	Q5EBM4	170 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	ZSCAN25	Q6NSZ9	544 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	RHOU	Q7L0Q8	258 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	MRGPRE	Q86SM8	312 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	CHERP	Q8IWX8	916 aa	Known RBP	6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	BPIFC	Q8NFQ6	507 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	FGFBP3	Q8TAT2	258 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	MRPL53	Q96EL3	112 aa	Known RBP	6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	NRBF2	Q96F24	287 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	COQ2	Q96H96	371 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	SGK494	Q96LW2	274 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	C12orf66	Q96MD2	445 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	VSTM2L	Q96N03	204 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	S1PR3	Q99500	378 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	CDCA3	Q99618	268 aa	Predicted RBP	6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	MAP3K3	Q99759	626 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	OMD	Q99983	421 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	NDUFAF3	Q9BU61	184 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	C1QTNF7	Q9BXJ2	289 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	NUSAP1	Q9BXS6	441 aa	Known RBP	6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	POLDIP3	Q9BY77	421 aa	Known RBP	6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	ARRDC1-AS1	Q9H2J1	176 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	C5orf66	Q9H5L9	145 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	MAP6D1	Q9H9H5	199 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	HACD3	Q9P035	362 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	LHX3	Q9UBR4	397 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	KLK13	Q9UKR3	277 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	CDH9	Q9ULB4	789 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	NCKAP1	Q9Y2A7	1128 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	IFT52	Q9Y366	437 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	TCAF1	Q9Y4C2	921 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	ADGRA3	Q8IWK6	1321 aa		6.22	□□□□□ -1.41
LRCH3-215	ENST00000476664	SDK1	Q7Z5N4	2213 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	RNF222	A6NCQ9	220 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	OR5K3	A6NET4	321 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	ZNF879	B4DU55	563 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	MDM4	O15151	490 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	LDB2	O43679	373 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	JAK2	O60674	1132 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	SCGN	O76038	276 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	ALPI	P09923	528 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	CCDC172	P0C7W6	258 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	ODC1	P11926	461 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	MPL	P40238	635 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	CDKN1B	P46527	198 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	CDH4	P55283	916 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	BNC1	Q01954	994 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	NFATC2	Q13469	925 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	ZNF268	Q14587	947 aa	Predicted RBP	6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	HEPACAM	Q14CZ8	416 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	EXOSC7	Q15024	291 aa	Known RBP	6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	P2RY14	Q15391	338 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	ZSWIM7	Q19AV6	140 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	LRRC66	Q68CR7	880 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	CWC27	Q6UX04	472 aa	Known RBP	6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	KDM7A	Q6ZMT4	941 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	G2E3	Q7L622	706 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	GOLGA7	Q7Z5G4	137 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	C17orf47	Q8NEP4	570 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	OR5D13	Q8NGL4	314 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	OR4L1	Q8NH43	312 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	SLC38A5	Q8WUX1	472 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	SENP5	Q96HI0	755 aa	Predicted RBP	6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	CXorf58	Q96LI9	332 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	CASD1	Q96PB1	797 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	CITED1	Q99966	193 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	WWP1	Q9H0M0	922 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	DPEP2	Q9H4A9	486 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	PCDH9	Q9HC56	1237 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	EXOC1	Q9NV70	894 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	SERGEF	Q9UGK8	458 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	DAPK2	Q9UIK4	370 aa		6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	MRTO4	Q9UKD2	239 aa	Known RBP	6.21	□□□□□ -1.42
LRCH3-215	ENST00000476664	RIPK3	Q9Y572	518 aa		6.21	□□□□□ -1.42

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