RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CT45A8P0DMV1 189 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 CT45A9P0DMV2 189 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 NAGAP17050 411 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 SDC1P18827 310 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 CASP3P42574 277 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 SERPINB4P48594 390 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 CORO7P57737 925 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 PLCXD2Q0VAA5 305 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 ART3Q13508 389 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 CT45A2Q5DJT8 189 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 TBCELQ5QJ74 424 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 FNDC7Q5VTL7 733 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 NPSR1Q6W5P4 371 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 DDIASQ8IXT1 998 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 MARVELD2Q8N4S9 558 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 BTBD9Q96Q07 612 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 NODALQ96S42 347 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 ANGPTL4Q9BY76 406 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 GIMAP2Q9UG22 337 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 PRSS44E7EML9 344 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 UGT2B11O75310 529 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 TUBBP07437 444 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 ENDOUP21128 410 aaKnown RBP19.39■□□□□ 0.69
LIME1-204ENST00000476183 GRNP28799 593 aaKnown RBP19.39■□□□□ 0.69
LIME1-204ENST00000476183 SERPINB5P36952 375 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 MC3RP41968 323 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 GALNTL6Q49A17 601 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 XKR7Q5GH72 579 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 ANKRD26P1Q6NSI1 321 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 TMEM107Q6UX40 140 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 SLC34A3Q8N130 599 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 RPRMLQ8N4K4 120 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 CLHC1Q8NHS4 586 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 PHF10Q8WUB8 498 aaKnown RBP19.39■□□□□ 0.69
LIME1-204ENST00000476183 ZNF597Q96LX8 424 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 C3orf30Q96M34 536 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 AMDHD1Q96NU7 426 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 TSSK3Q96PN8 268 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 CCT7Q99832 543 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 CENPHQ9H3R5 247 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 FOLH1BQ9HBA9 442 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 SSU72Q9NP77 194 aaKnown RBP19.39■□□□□ 0.69
LIME1-204ENST00000476183 PNPLA3Q9NST1 481 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 BAIAP2L1Q9UHR4 511 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 TEX15Q9BXT5 2789 aa19.39■□□□□ 0.69
LIME1-204ENST00000476183 WDR91A4D1P6 747 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 AQP7O14520 342 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 SUSD5O60279 629 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 ERN1O75460 977 aaKnown RBP19.38■□□□□ 0.69
LIME1-204ENST00000476183 NTSP30990 170 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 PTGDSP41222 190 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 SMSP52788 366 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 MPP2Q14168 576 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 GXYLT1Q4G148 440 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 ZNF385BQ569K4 471 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 TMEM198Q66K66 360 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 XKRXQ6PP77 449 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 NUP54Q7Z3B4 507 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 NUDCD3Q8IVD9 361 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 OR5M9Q8NGP3 310 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 TMBIM1Q969X1 311 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 SLC6A15Q9H2J7 730 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 LDAHQ9H6V9 325 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 ZNF395Q9H8N7 513 aaPredicted RBP19.38■□□□□ 0.69
LIME1-204ENST00000476183 SPRR3Q9UBC9 169 aa19.38■□□□□ 0.69
LIME1-204ENST00000476183 A0A087WV62 115 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 TRGV5A0A0B4J1U4 118 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 OR14I1A6ND48 311 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 UPK1AO00322 258 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 AKAP10O43572 662 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 ITM2AO43736 263 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 HCN1O60741 890 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 LYPLA1O75608 230 aaPredicted RBP19.37■□□□□ 0.69
LIME1-204ENST00000476183 SNX4O95219 450 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 AGAP20933 346 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 MAN2A2P49641 1150 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 RPP38P78345 283 aaKnown RBP19.37■□□□□ 0.69
LIME1-204ENST00000476183 TMEM81Q6P7N7 255 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 OR4N2Q8NGD1 307 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 CIDECQ96AQ7 238 aaPredicted RBP19.37■□□□□ 0.69
LIME1-204ENST00000476183 GNRHR2Q96P88 292 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 STMN4Q9H169 189 aaPredicted RBP19.37■□□□□ 0.69
LIME1-204ENST00000476183 UBQLN3Q9H347 655 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 TP63Q9H3D4 680 aaPredicted RBP19.37■□□□□ 0.69
LIME1-204ENST00000476183 ACKR4Q9NPB9 350 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 QPCTLQ9NXS2 382 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 C19orf53Q9UNZ5 99 aaPredicted RBP19.37■□□□□ 0.69
LIME1-204ENST00000476183 TMED5Q9Y3A6 229 aa19.37■□□□□ 0.69
LIME1-204ENST00000476183 KLF2Q9Y5W3 355 aaPredicted RBP19.37■□□□□ 0.69
LIME1-204ENST00000476183 PHF3Q92576 2039 aaKnown RBP19.37■□□□□ 0.69
LIME1-204ENST00000476183 PLOD2O00469 737 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 SKAP2O75563 359 aaPredicted RBP19.36■□□□□ 0.69
LIME1-204ENST00000476183 PSMG1O95456 288 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 DHRS4L1P0CG22 281 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 BCKDHAP12694 445 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 GDF1P27539 372 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 PDE7AQ13946 482 aa19.36■□□□□ 0.69
LIME1-204ENST00000476183 SP5Q6BEB4 398 aaPredicted RBP19.36■□□□□ 0.69
LIME1-204ENST00000476183 ZNF551Q7Z340 670 aaPredicted RBP19.36■□□□□ 0.69
LIME1-204ENST00000476183 PACS2Q86VP3 889 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms