RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ERCC1P07992 297 aaPredicted RBP10.98□□□□□ -0.65
U2AF1-209ENST00000475639 SMIM10L2AP0DMW4 78 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 SMIM10L2BP0DMW5 78 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 EPHA2P29317 976 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 C21orf33P30042 268 aaPredicted RBP10.98□□□□□ -0.65
U2AF1-209ENST00000475639 IL10RBQ08334 325 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 LAPTM4AQ15012 233 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 SSX2Q16385 188 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 ZNF630Q2M218 657 aaPredicted RBP10.98□□□□□ -0.65
U2AF1-209ENST00000475639 RNASE10Q5GAN6 216 aaKnown RBP10.98□□□□□ -0.65
U2AF1-209ENST00000475639 SLC46A3Q7Z3Q1 461 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 TMPRSS9Q7Z410 1059 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 GPR149Q86SP6 731 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 AMIGO3Q86WK7 504 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 PHOSPHO1Q8TCT1 267 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 PNO1Q9NRX1 252 aaKnown RBP10.98□□□□□ -0.65
U2AF1-209ENST00000475639 LRFN1Q9P244 771 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 EXOSC1Q9Y3B2 195 aaKnown RBP10.98□□□□□ -0.65
U2AF1-209ENST00000475639 CMAHPQ9Y471 501 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 TMEM14AQ9Y6G1 99 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 MIA3Q5JRA6 1907 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 CCL22O00626 93 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 TOXO94900 526 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 IFNA17P01571 189 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 ENGP17813 658 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 BDH1Q02338 343 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 DBPQ10586 325 aaPredicted RBP10.98□□□□□ -0.65
U2AF1-209ENST00000475639 ARL6IP1Q15041 203 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 ODF4Q2M2E3 257 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 DCST2Q5T1A1 773 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 GTPBP8Q8N3Z3 284 aaPredicted RBP10.98□□□□□ -0.65
U2AF1-209ENST00000475639 LINC00469Q8N7U9 141 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 MARC2Q969Z3 335 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 L3HYPDHQ96EM0 354 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 SYT3Q9BQG1 590 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 UQCC2Q9BRT2 126 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 NLGN3Q9NZ94 848 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 ICKQ9UPZ9 632 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 AUP1Q9Y679 476 aa10.98□□□□□ -0.65
U2AF1-209ENST00000475639 PTPRZ1P23471 2315 aaPredicted RBP10.98□□□□□ -0.65
U2AF1-209ENST00000475639 A0A1B0GTL3 188 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 A0A1W2PQ09 198 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 SMLR1H3BR10 107 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 CDC7O00311 574 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 GABRDO14764 452 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ANKRD28O15084 1053 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 SLC19A2O60779 497 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 TRAPPC6AO75865 159 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 GJB1P08034 283 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 CAP1Q01518 475 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 FRG2Q64ET8 278 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ABHD13Q7L211 337 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ACBD4Q8NC06 268 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ELP5Q8TE02 316 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 SMPDL3AQ92484 453 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 OSTF1Q92882 214 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 FRG2BQ96QU4 278 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 FN3KQ9H479 309 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 GRHPRQ9UBQ7 328 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 TP53TG5Q9Y2B4 290 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 MYO9BQ13459 2157 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 LINC00862A6NCI5 91 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 B4DXG7 233 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 TGFB1P01137 390 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 C1QBP02746 253 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ARL2P36404 184 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ZNF79Q15937 498 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 AMZ1Q400G9 498 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 SPIN4Q56A73 249 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ZNF789Q5FWF6 425 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 DLEU7Q6UYE1 221 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 KIF18BQ86Y91 864 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 CCDC71Q8IV32 467 aaPredicted RBP10.97□□□□□ -0.65
U2AF1-209ENST00000475639 PNPLA1Q8N8W4 532 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 CPT1CQ8TCG5 803 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 PROKR1Q8TCW9 393 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 CMTM7Q96FZ5 175 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 WASH6PQ9NQA3 447 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ZIM2Q9NZV7 527 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 DNMT3AQ9Y6K1 912 aaPredicted RBP10.97□□□□□ -0.65
U2AF1-209ENST00000475639 V9GYH0 126 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ANK1P16157 1881 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 SIX3O95343 332 aaPredicted RBP10.97□□□□□ -0.65
U2AF1-209ENST00000475639 NKX6-1P78426 367 aaPredicted RBP10.97□□□□□ -0.65
U2AF1-209ENST00000475639 KIAA0319Q5VV43 1072 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 TCEANCQ8N8B7 351 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 C1orf127Q8N9H9 656 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 FAM46DQ8NEK8 389 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ORAI3Q9BRQ5 295 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 LDAHQ9H6V9 325 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 NIPAL2Q9H841 368 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 FOLH1BQ9HBA9 442 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 HAO2Q9NYQ3 351 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 MGAT4CQ9UBM8 478 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 DICER1Q9UPY3 1922 aaKnown RBP10.97□□□□□ -0.65
U2AF1-209ENST00000475639 A8MXE2 369 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 TOR1AO14656 332 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 FGF4P08620 206 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 MAT2AP31153 395 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms