RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 AKAP9Q99996 3911 aa16.96■□□□□ 0.31
COL7A1-209ENST00000474432 GNG14A0A1W2PPG7 69 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 C2orf72A6NCS6 295 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 GNB5O14775 395 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 ICOSLGO75144 302 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 MYL2P10916 166 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 POU3F2P20265 443 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-209ENST00000474432 CRHR1P34998 444 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 WNT3P56703 355 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 CORO7P57737 925 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 DNAJB13P59910 316 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 DCAF7P61962 342 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 ACSF3Q4G176 576 aaPredicted RBP16.95■□□□□ 0.3
COL7A1-209ENST00000474432 NHSL2Q5HYW2 709 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 NPSR1Q6W5P4 371 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 TRIM46Q7Z4K8 759 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 PACS2Q86VP3 889 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 CNPY4Q8N129 248 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 EPS8L3Q8TE67 593 aaKnown RBP16.95■□□□□ 0.3
COL7A1-209ENST00000474432 RNF138Q8WVD3 245 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 CCDC126Q96EE4 140 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 VSTM2LQ96N03 204 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 BTBD9Q96Q07 612 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 PRDM14Q9GZV8 571 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 GALNT9Q9HCQ5 603 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 PRODH2Q9UF12 536 aa16.95■□□□□ 0.3
COL7A1-209ENST00000474432 C15orf38-AP3S2A0A0A6YYH1 394 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 FRG2CA6NGY1 282 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 B4DXG7 233 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 SNPHO15079 494 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 TSPAN2O60636 221 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 TRAPPC6AO75865 159 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 EPPINO95925 133 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 ANXA4P09525 319 aaPredicted RBP16.94■□□□□ 0.3
COL7A1-209ENST00000474432 BMP7P18075 431 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 CEACAM8P31997 349 aaPredicted RBP16.94■□□□□ 0.3
COL7A1-209ENST00000474432 MASP1P48740 699 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 RPP38P78345 283 aaKnown RBP16.94■□□□□ 0.3
COL7A1-209ENST00000474432 PLCXD2Q0VAA5 305 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 HEPACAMQ14CZ8 416 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 WIPI1Q5MNZ9 446 aaPredicted RBP16.94■□□□□ 0.3
COL7A1-209ENST00000474432 FAM71E1Q6IPT2 247 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 SLC30A6Q6NXT4 461 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 ANGPTL8Q6UXH0 198 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 LIX1Q8N485 282 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 WDSUB1Q8N9V3 476 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 RELL2Q8NC24 303 aaPredicted RBP16.94■□□□□ 0.3
COL7A1-209ENST00000474432 OR7G2Q8NG99 324 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 UBLCP1Q8WVY7 318 aaPredicted RBP16.94■□□□□ 0.3
COL7A1-209ENST00000474432 TMBIM1Q969X1 311 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 ERP27Q96DN0 273 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 SLC35A4Q96G79 324 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 UGT2B28Q9BY64 529 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 METTL7AQ9H8H3 244 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 OXSMQ9NWU1 459 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 F8P00451 2351 aa16.94■□□□□ 0.3
COL7A1-209ENST00000474432 DOCK7Q96N67 2140 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 AHRRA9YTQ3 701 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 MYO1GB0I1T2 1018 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 PLOD3O60568 738 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 KRT15P19012 456 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 DDCP20711 480 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 SLC18A2Q05940 514 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 SNTA1Q13424 505 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 KIAA0040Q15053 153 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 CCDC153Q494R4 210 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 TNIP2Q8NFZ5 429 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 WDYHV1Q96HA8 205 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 OSBPL11Q9BXB4 747 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 TAS2R7Q9NYW3 318 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 GRID1Q9ULK0 1009 aa16.93■□□□□ 0.3
COL7A1-209ENST00000474432 CCDC151A5D8V7 595 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 OR6C70A6NIJ9 312 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 SMIM23A6NLE4 172 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 CDH16O75309 829 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 BCAS2O75934 225 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-209ENST00000474432 CPA3P15088 417 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 CCT5P48643 541 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 ZNF763Q0D2J5 394 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 C2orf80Q0P641 193 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 SLC25A35Q3KQZ1 300 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 SPDYAQ5MJ70 313 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 YRDCQ86U90 279 aaKnown RBP16.92■□□□□ 0.3
COL7A1-209ENST00000474432 SAMD14Q8IZD0 417 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-209ENST00000474432 FAM83FQ8NEG4 500 aaPredicted RBP16.92■□□□□ 0.3
COL7A1-209ENST00000474432 OR4N2Q8NGD1 307 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 OR1J4Q8NGS1 313 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 RDH11Q8TC12 318 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 SHCBP1LQ9BZQ2 653 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 ANKZF1Q9H8Y5 726 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 FOLH1BQ9HBA9 442 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 MYNNQ9NPC7 610 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 SERHLQ9NQF3 203 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 PFDN4Q9NQP4 134 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 L3MBTL1Q9Y468 752 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 PTGDR2Q9Y5Y4 395 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 HIVEP1P15822 2718 aa16.92■□□□□ 0.3
COL7A1-209ENST00000474432 ANKHD1Q8IWZ3 2542 aaKnown RBP16.92■□□□□ 0.3
COL7A1-209ENST00000474432 PCNX3Q9H6A9 2034 aa16.91■□□□□ 0.3
COL7A1-209ENST00000474432 CELSR1Q9NYQ6 3014 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms