RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ARSJQ5FYB0 599 aaPredicted RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 RNASE10Q5GAN6 216 aaKnown RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 PIGGQ5H8A4 983 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 DCAF10Q5QP82 559 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SPOUT1Q5T280 376 aaKnown RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 ATAD3CQ5T2N8 411 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ZNF544Q6NX49 715 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 TMEM182Q6ZP80 229 aaPredicted RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 C11orf57Q6ZUT1 292 aaPredicted RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 TTLL10Q6ZVT0 673 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 PAQR9Q6ZVX9 377 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 TMPRSS11FQ6ZWK6 438 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 NLRX1Q86UT6 975 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SNX29P2Q8IUI4 249 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 RDH10Q8IZV5 341 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 HORMAD2Q8N7B1 307 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 LMNTD1Q8N9Z9 388 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 MFSD9Q8NBP5 474 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SLC44A5Q8NCS7 719 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SEMA6DQ8NFY4 1073 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 MARCH1Q8TCQ1 289 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ABHD3Q8WU67 409 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 MIB2Q96AX9 1013 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 NTNG2Q96CW9 530 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 CNBD2Q96M20 576 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 C3orf30Q96M34 536 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ALG8Q9BVK2 526 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ULBP1Q9BZM6 244 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ELOVL6Q9H5J4 265 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 APMAPQ9HDC9 416 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SPG21Q9NZD8 308 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 KANSL3Q9P2N6 904 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 GSTK1Q9Y2Q3 226 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 KCNIP3Q9Y2W7 256 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 PTPRTO14522 1441 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ZNF609O15014 1411 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SYNJ2O15056 1496 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 FEZF1A0PJY2 475 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 LNP1A1A4G5 178 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 ARHGEF33A8MVX0 844 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 J3QRK9 145 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 P2RY10O00398 339 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 KPNA3O00505 521 aaPredicted RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 LYPLA1O75608 230 aaPredicted RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 TRUB2O95900 331 aaKnown RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 C9P02748 559 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 RLN2P04090 185 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 PNMTP11086 282 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 CETPP11597 493 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 ANXA7P20073 488 aaKnown RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 EDN2P20800 178 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 FPR1P21462 350 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 ELAVL4P26378 380 aaKnown RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 GDNFP39905 211 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 EVX1P49640 407 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 RGS6P49758 472 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 EFNA3P52797 238 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 VSX2P58304 361 aaPredicted RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 RPL26P61254 145 aaKnown RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 RANP62826 216 aaKnown RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 SSBP2P81877 361 aaPredicted RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 VLDLRP98155 873 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 MICBQ29980 383 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 PHF19Q5T6S3 580 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 ABLIM2Q6H8Q1 611 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 C17orf99Q6UX52 265 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 ASB18Q6ZVZ8 466 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 RRM2BQ7LG56 351 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 C1orf87Q8N0U7 546 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 LCORLQ8N3X6 602 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 CPXM2Q8N436 756 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 KCNG3Q8TAE7 436 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 ACOT11Q8WXI4 607 aaPredicted RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 BIRC7Q96CA5 298 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 FBXL8Q96CD0 374 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 PPP1R16AQ96I34 528 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 COL21A1Q96P44 957 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 TNFRSF13CQ96RJ3 184 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 SERPINI1Q99574 410 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 KATNB1Q9BVA0 655 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 DDA1Q9BW61 102 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 SCNM1Q9BWG6 230 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 MRPS26Q9BYN8 205 aaKnown RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 ZDHHC5Q9C0B5 715 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 NMNAT1Q9HAN9 279 aaPredicted RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 RHOFQ9HBH0 211 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 CPNE5Q9HCH3 593 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 LHX9Q9NQ69 397 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 ZNF224Q9NZL3 707 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 STOX2Q9P2F5 926 aaPredicted RBP3.28□□□□□ -1.89
UBR3-208ENST00000474426 ZNF212Q9UDV6 495 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 SLC7A11Q9UPY5 501 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 PKP3Q9Y446 797 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 PEX16Q9Y5Y5 336 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 ANKRD50Q9ULJ7 1429 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 ADGRL2O95490 1459 aa3.28□□□□□ -1.89
UBR3-208ENST00000474426 TARBP1Q13395 1621 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 A0A1W2PPM1 405 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MPTX1A8MV57 137 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 H7C2Y5 167 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms