RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 COMMD6Q7Z4G1 85 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 OAFQ86UD1 273 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 CBARPQ8N350 705 aaPredicted RBP17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 FTMTQ8N4E7 242 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 ADAMTS19Q8TE59 1207 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 GIMAP1Q8WWP7 306 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 DACT3Q96B18 629 aaPredicted RBP17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 TMEM19Q96HH6 336 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 C19orf43Q9BQ61 176 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 ACAD8Q9UKU7 415 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 A0A1W2PRB8 838 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 NPIPB15A6NHN6 443 aaPredicted RBP17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 SAP18O00422 153 aaKnown RBP17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 SLC6A11P48066 632 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 RFX3P48380 749 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 TPMTP51580 245 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 SMSP52788 366 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 ZP1P60852 638 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 NHLRC3Q5JS37 347 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 SHEQ5VZ18 495 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 KIAA1211LQ6NV74 962 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 RFLNAQ6ZTI6 216 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 PRICKLE2Q7Z3G6 844 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 TECPR1Q7Z6L1 1165 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 LINC00518Q8N0U6 118 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 SAMD12Q8N8I0 201 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 GKN1Q9NS71 199 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 CBLCQ9ULV8 474 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 CSNK1G3Q9Y6M4 447 aa17.56■□□□□ 0.4
ECHDC1-214ENST00000474289 TUBAL3A6NHL2 446 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 HRO43593 1189 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 MMP12P39900 470 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 ZNF791Q3KP31 576 aaPredicted RBP17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 CD300LDQ6UXZ3 194 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 TFAP2EQ6VUC0 442 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 ZNF687Q8N1G0 1237 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 HORMAD2Q8N7B1 307 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 OR4F15Q8NGB8 312 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 OR4K5Q8NGD3 323 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 ERMAPQ96PL5 475 aaPredicted RBP17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 CWH43Q9H720 699 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 MCCC2Q9HCC0 563 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 A4GNTQ9UNA3 340 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 ZFR2Q9UPR6 939 aaKnown RBP17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 Q9Y3F1 56 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 SSNA1O43805 119 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 CCR6P51684 374 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 IER5LQ5T953 404 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 HBMQ6B0K9 141 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 USP50Q70EL3 339 aaPredicted RBP17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 MRPS31Q92665 395 aaKnown RBP17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 PTP4A1Q93096 173 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 EGLN3Q9H6Z9 239 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 CXorf36Q9H7Y0 433 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 GPBP1L1Q9HC44 474 aaPredicted RBP17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 FAM8A1Q9UBU6 413 aa17.55■□□□□ 0.4
ECHDC1-214ENST00000474289 ARHGEF33A8MVX0 844 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 VNN2O95498 520 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 LCN1P31025 176 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 ACSL1P33121 698 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 CSNK1DP48730 415 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 TAS2R50P59544 299 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 CLLU1OSQ5K130 101 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 AGTRAPQ6RW13 159 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 RSPO2Q6UXX9 243 aaPredicted RBP17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 IQCHQ86VS3 1027 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 MEX3DQ86XN8 651 aaKnown RBP17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 WDR48Q8TAF3 677 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 ADAMTS14Q8WXS8 1223 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 ZNF354BQ96LW1 612 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 SECISBP2Q96T21 854 aaKnown RBP17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 CACNG6Q9BXT2 260 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 BRD9Q9H8M2 597 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 TMEM5Q9Y2B1 443 aa17.54■□□□□ 0.4
ECHDC1-214ENST00000474289 IGLV3-16A0A075B6K0 115 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 SLC22A23A1A5C7 686 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 EFCAB14O75071 495 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 STC2O76061 302 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 IRF1P10914 325 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 DRD2P14416 443 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 SELENOPP49908 381 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 MMP21Q8N119 569 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 C16orf78Q8WTQ4 265 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 FOXJ1Q92949 421 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 WBP2Q969T9 261 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 METTL17Q9H7H0 456 aaPredicted RBP17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 IFT46Q9NQC8 304 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 GSAPA4D1B5 854 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 PI15O43692 258 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 KLHL18O94889 574 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 THBS2P35442 1172 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 KCNJ5P48544 419 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 SMIM11AP58511 58 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 B2MP61769 119 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 NDUFA9Q16795 377 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 CCSMST1Q4G0I0 132 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 PLEKHS1Q5SXH7 462 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 ADGRF1Q5T601 910 aa17.53■□□□□ 0.4
ECHDC1-214ENST00000474289 FAM71E1Q6IPT2 247 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms