RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 OR2W6PQ8NHA6 318 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 LRRC46Q96FV0 321 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 COL21A1Q96P44 957 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 FAM111AQ96PZ2 611 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 GATA5Q9BWX5 397 aaPredicted RBP18.78■□□□□ 0.6
SNX13-206ENST00000474067 C3orf14Q9HBI5 128 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 OR10H1Q9Y4A9 318 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 NCOA6Q14686 2063 aaPredicted RBP18.78■□□□□ 0.6
SNX13-206ENST00000474067 LRRC3CA6NJW4 275 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 FOXO6A8MYZ6 492 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 AHRRA9YTQ3 701 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 MYO1GB0I1T2 1018 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 REM1O75628 298 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 TRAPPC6AO75865 159 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 MYZAPP0CAP1 466 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 TOMM20Q15388 145 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 R3HCC1LQ7Z5L2 792 aaKnown RBP18.77■□□□□ 0.6
SNX13-206ENST00000474067 DDIASQ8IXT1 998 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 PRR22Q8IZ63 422 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 OR10Q1Q8NGQ4 319 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 PPP1R14CQ8TAE6 165 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 TCP10LQ8TDR4 215 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 SLC35A4Q96G79 324 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 PPP3R2Q96LZ3 170 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 KCNJ16Q9NPI9 418 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 PNPLA3Q9NST1 481 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 DDX18Q9NVP1 670 aaKnown RBP18.77■□□□□ 0.6
SNX13-206ENST00000474067 C15orf41Q9Y2V0 281 aa18.77■□□□□ 0.6
SNX13-206ENST00000474067 C15orf38-AP3S2A0A0A6YYH1 394 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 PLOD2O00469 737 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 RGS16O15492 202 aaPredicted RBP18.76■□□□□ 0.59
SNX13-206ENST00000474067 CBR3O75828 277 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 HPNP05981 417 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 ALDH3A1P30838 453 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 CLK3P49761 638 aaKnown RBP18.76■□□□□ 0.59
SNX13-206ENST00000474067 CDK9P50750 372 aaKnown RBP18.76■□□□□ 0.59
SNX13-206ENST00000474067 PNLIPRP2P54317 469 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 PMPCAQ10713 525 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 NNATQ16517 81 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 KRT71Q3SY84 523 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 VPS26BQ4G0F5 336 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 C1orf185Q5T7R7 199 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 KANK2Q63ZY3 851 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 TIGD3Q6B0B8 471 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 CLEC6AQ6EIG7 209 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 LRIG3Q6UXM1 1119 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 TMEM64Q6YI46 380 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 NATD1Q8N6N6 113 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 LILRB4Q8NHJ6 448 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.76■□□□□ 0.593e-7■■■■■ 37.7
SNX13-206ENST00000474067 MTERF3Q96E29 417 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 ZBED6CLQ96FA7 236 aaPredicted RBP18.76■□□□□ 0.59
SNX13-206ENST00000474067 PROK2Q9HC23 129 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 Q9N2J8 555 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 SDHAF3Q9NRP4 125 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 DTX4Q9Y2E6 619 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 FIS1Q9Y3D6 152 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 TRAF6Q9Y4K3 522 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 LIPGQ9Y5X9 500 aa18.76■□□□□ 0.59
SNX13-206ENST00000474067 PRAMEF25A6NGN4 478 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 PDPK1O15530 556 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 GPC1P35052 558 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 PEX19P40855 299 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 ZNF155Q12901 538 aaPredicted RBP18.75■□□□□ 0.59
SNX13-206ENST00000474067 CYP27C1Q4G0S4 372 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 OR5M9Q8NGP3 310 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 KAT2AQ92830 837 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 PPCDCQ96CD2 204 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 VSTM2LQ96N03 204 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 SPOCK3Q9BQ16 436 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 TTYH2Q9BSA4 534 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 FOLH1BQ9HBA9 442 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 ALKBH4Q9NXW9 302 aa18.75■□□□□ 0.59
SNX13-206ENST00000474067 EML6Q6ZMW3 1958 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 SNPHO15079 494 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 CTIFO43310 598 aaKnown RBP18.74■□□□□ 0.59
SNX13-206ENST00000474067 TBX19O60806 448 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 ACTL6AO96019 429 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 JUNP05412 331 aaKnown RBP18.74■□□□□ 0.59
SNX13-206ENST00000474067 RFPL3SP0C7P2 107 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 SSTR2P30874 369 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 ZFP36L2P47974 494 aaKnown RBP18.74■□□□□ 0.59
SNX13-206ENST00000474067 DUSP2Q05923 314 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 DUSP8Q13202 625 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 DECR1Q16698 335 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 ARL13AQ5H913 290 aaPredicted RBP18.74■□□□□ 0.59
SNX13-206ENST00000474067 NHSL2Q5HYW2 709 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 EMC4Q5J8M3 183 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 FAM180BQ6P0A1 224 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 ANGPTL8Q6UXH0 198 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 MCEMP1Q8IX19 187 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 CEP70Q8NHQ1 597 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 TWIST2Q8WVJ9 160 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 HGDQ93099 445 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 TMBIM1Q969X1 311 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 UBQLN3Q9H347 655 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 REEP4Q9H6H4 257 aa18.74■□□□□ 0.59
SNX13-206ENST00000474067 SSU72Q9NP77 194 aaKnown RBP18.74■□□□□ 0.59
SNX13-206ENST00000474067 C19orf53Q9UNZ5 99 aaPredicted RBP18.74■□□□□ 0.59
SNX13-206ENST00000474067 MAPRE3Q9UPY8 281 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms