RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 GSK3BP49841 420 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 BTG2P78543 158 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 RHAGQ02094 409 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 AIMP2Q13155 320 aaKnown RBP12.35□□□□□ -0.43
BRAT1-205ENST00000473879 TP53BP2Q13625 1128 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 MYBPC3Q14896 1274 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 LTB4RQ15722 352 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 CYP51A1Q16850 503 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 ZNF628Q5EBL2 1059 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 C1orf146Q5VVC0 180 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 ERICH5Q6P6B1 374 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 KIRREL2Q6UWL6 708 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 SERPINA11Q86U17 422 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 GALNT12Q8IXK2 581 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 GALNT16Q8N428 558 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 RNF148Q8N7C7 305 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 FAM13CQ8NE31 585 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 OR2T12Q8NG77 320 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 OR10A6Q8NH74 314 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 PNPT1Q8TCS8 783 aaKnown RBP12.35□□□□□ -0.43
BRAT1-205ENST00000473879 ELP4Q96EB1 424 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 RBM18Q96H35 190 aaKnown RBP12.35□□□□□ -0.43
BRAT1-205ENST00000473879 SLC35G5Q96KT7 338 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 MS4A4EQ96PG1 132 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 TRIM8Q9BZR9 551 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 TRIM15Q9C019 465 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 TRIM4Q9C037 500 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 IKZF5Q9H5V7 419 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 EPS8L2Q9H6S3 715 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 THUMPD1Q9NXG2 353 aaKnown RBP12.35□□□□□ -0.43
BRAT1-205ENST00000473879 C3orf18Q9UK00 162 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 FBXL4Q9UKA2 621 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 PACSIN3Q9UKS6 424 aa12.35□□□□□ -0.43
BRAT1-205ENST00000473879 TNRC6AQ8NDV7 1962 aaKnown RBP12.34□□□□□ -0.43
BRAT1-205ENST00000473879 ASH1LQ9NR48 2969 aaKnown RBP12.34□□□□□ -0.43
BRAT1-205ENST00000473879 IGKV3D-11A0A0A0MRZ8 115 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 TGFBR3LH3BV60 316 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 PCDH17O14917 1159 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 PLOD3O60568 738 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 COQ9O75208 318 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 GMNNO75496 209 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 IFNA16P05015 189 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 HEXBP07686 556 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 CRATP43155 626 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 KHKP50053 298 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 EMP2P54851 167 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 TRAP1Q12931 704 aaKnown RBP12.34□□□□□ -0.43
BRAT1-205ENST00000473879 TRIM25Q14258 630 aaKnown RBP12.34□□□□□ -0.43
BRAT1-205ENST00000473879 RGNQ15493 299 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 PRICKLE4Q2TBC4 344 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 C6orf120Q7Z4R8 191 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 LAPTM4BQ86VI4 370 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 IFNEQ86WN2 208 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 CALHM3Q86XJ0 350 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 PRSS58Q8IYP2 241 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 CLEC4FQ8N1N0 589 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 OR2L13Q8N349 312 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 VWA5B2Q8N398 1253 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 PLPP5Q8NEB5 264 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 NUP43Q8NFH3 380 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 ADCY4Q8NFM4 1077 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 OR11G2Q8NGC1 345 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 KAT2AQ92830 837 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 RIT1Q92963 219 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 REXO5Q96IC2 774 aaKnown RBP12.34□□□□□ -0.43
BRAT1-205ENST00000473879 MAGED4Q96JG8 741 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 VN1R1Q9GZP7 353 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 ADAP2Q9NPF8 381 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 NECTIN3Q9NQS3 549 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 MAT2BQ9NZL9 334 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 NTMQ9P121 344 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 MAGEL2Q9UJ55 1249 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 MKL2Q9ULH7 1088 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 POMPQ9Y244 141 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 CLDN16Q9Y5I7 305 aa12.34□□□□□ -0.43
BRAT1-205ENST00000473879 LOC102723996A0A087X1L8 192 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 TCRBV16S1A1N1A0A5B0 115 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 ELOVL7A1L3X0 281 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 IDSB3KWA1 339 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 GSTA4O15217 222 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 DPM1O60762 260 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 BCAS2O75934 225 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-205ENST00000473879 HPP00738 406 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 PRIM2P49643 509 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 PRKAG1P54619 331 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 DSTNP60981 165 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 TLE1Q04724 770 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 MAP4K2Q12851 820 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 FLOT2Q14254 428 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 ELAVL1Q15717 326 aaKnown RBP12.33□□□□□ -0.44
BRAT1-205ENST00000473879 NSDHLQ15738 373 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.33□□□□□ -0.44
BRAT1-205ENST00000473879 GCNT6Q5T4J0 391 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 TMEM205Q6UW68 189 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 RNF130Q86XS8 419 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 MICU2Q8IYU8 434 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 FAM156AQ8NDB6 213 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 OR7G2Q8NG99 324 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 METTL21AQ8WXB1 218 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 JADE3Q92613 823 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms