RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 EXO1Q9UQ84 846 aaKnown RBP20.66■□□□□ 0.9
PTP4A1-203ENST00000473334 GPR55Q9Y2T6 319 aaPredicted RBP20.66■□□□□ 0.9
PTP4A1-203ENST00000473334 DNAJC15Q9Y5T4 150 aa20.66■□□□□ 0.9
PTP4A1-203ENST00000473334 CACNA1DQ01668 2161 aa20.66■□□□□ 0.9
PTP4A1-203ENST00000473334 CACNA1CQ13936 2221 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 SLITRK5O94991 958 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 JUNP05412 331 aaKnown RBP20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 FGF4P08620 206 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 CREB1P16220 341 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 ENDOUP21128 410 aaKnown RBP20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 NTSP30990 170 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 NCBP2P52298 156 aaKnown RBP eCLIP20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 KRT71Q3SY84 523 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 ARL13AQ5H913 290 aaPredicted RBP20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 WLSQ5T9L3 541 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 Q6ZSR9 355 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 RPRMLQ8N4K4 120 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 OR7G2Q8NG99 324 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 OR2T11Q8NH01 316 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 NEIL3Q8TAT5 605 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 NTNG2Q96CW9 530 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 TMEM41AQ96HV5 264 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 FCRL1Q96LA6 429 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 VSTM2LQ96N03 204 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 SLC6A15Q9H2J7 730 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 METTL7AQ9H8H3 244 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 FOLH1BQ9HBA9 442 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 SPRR3Q9UBC9 169 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 TNFRSF10DQ9UBN6 386 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 ACAD8Q9UKU7 415 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 RAB21Q9UL25 225 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 ITPR2Q14571 2701 aa20.65■□□□□ 0.9
PTP4A1-203ENST00000473334 TYROBPO43914 113 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 UGT2B11O75310 529 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 ERN1O75460 977 aaKnown RBP20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 LINC00032P0C843 101 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 TACR1P25103 407 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 ACVR2AP27037 513 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 SERPINB5P36952 375 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 PSPHP78330 225 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 FNDC7Q5VTL7 733 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 DESI1Q6ICB0 168 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 ZNF585AQ6P3V2 769 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 ZCCHC23Q6ZST2 131 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 CLYBLQ8N0X4 340 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 LIX1Q8N485 282 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 CA5BP1Q8WTZ4 195 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 TWIST2Q8WVJ9 160 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 RND1Q92730 232 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 TMBIM1Q969X1 311 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 EGLN2Q96KS0 407 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 NODALQ96S42 347 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 CCT7Q99832 543 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 OSBPL11Q9BXB4 747 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 GLIPR2Q9H4G4 154 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 TAS2R9Q9NYW1 312 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 C15orf41Q9Y2V0 281 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 TRAF6Q9Y4K3 522 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 TEX15Q9BXT5 2789 aa20.64■□□□□ 0.89
PTP4A1-203ENST00000473334 A0A087WV62 115 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 TMEM233B4DJY2 109 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 LSM1O15116 133 aaKnown RBP20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 WDR1O75083 606 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 COQ9O75208 318 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 CT45A8P0DMV1 189 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 CT45A9P0DMV2 189 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 ZNF844Q08AG5 666 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 CT45A2Q5DJT8 189 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 SLC30A6Q6NXT4 461 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 ACAD11Q709F0 780 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 DDIASQ8IXT1 998 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 ASB5Q8WWX0 329 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 COL21A1Q96P44 957 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 UBQLN3Q9H347 655 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 RUBCNLQ9H714 662 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 TMED5Q9Y3A6 229 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 FREM3P0C091 2139 aa20.63■□□□□ 0.89
PTP4A1-203ENST00000473334 OR6C70A6NIJ9 312 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 PLOD2O00469 737 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 RGS16O15492 202 aaPredicted RBP20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 ABCB7O75027 752 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 NME6O75414 186 aaPredicted RBP20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 REM1O75628 298 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 BPGMP07738 259 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 SDC1P18827 310 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 ELAVL4P26378 380 aaKnown RBP20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 MC3RP41968 323 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 ETV4P43268 484 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 TRPC1P48995 793 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 CDK9P50750 372 aaKnown RBP20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 CORO7P57737 925 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 NUP107P57740 925 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 RPL38P63173 70 aaKnown RBP20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 PMPCAQ10713 525 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 ZNF155Q12901 538 aaPredicted RBP20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 SNTA1Q13424 505 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 UGT3A2Q3SY77 523 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 SH2D4BQ5SQS7 431 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 TMEM107Q6UX40 140 aa20.62■□□□□ 0.89
PTP4A1-203ENST00000473334 NPSR1Q6W5P4 371 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms