RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ITKQ08881 620 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 SLC14A1Q13336 389 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 DSG2Q14126 1118 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 SUSD1Q6UWL2 747 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 TAC4Q86UU9 113 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 MIB1Q86YT6 1006 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 NAXDQ8IW45 347 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 TIGD4Q8IY51 512 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 ZNF655Q8N720 491 aaPredicted RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 SLC9A6Q92581 669 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 LINGO1Q96FE5 620 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 CDKN2AIPNLQ96HQ2 116 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 ERMAPQ96PL5 475 aaPredicted RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 GFM1Q96RP9 751 aaKnown RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 INPP5KQ9BT40 448 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 POLR2J2Q9GZM3 115 aaKnown RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 IPPKQ9H8X2 491 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 CD93Q9NPY3 652 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 NLE1Q9NVX2 485 aaPredicted RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 SDHAF2Q9NX18 166 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 ZNF222Q9UK12 451 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 KCTD3Q9Y597 815 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 KCNMB2Q9Y691 235 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 ASH1LQ9NR48 2969 aaKnown RBP9.54□□□□□ -0.88
APTX-216ENST00000472896 A0A1W2PQF6 199 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 ISM1B1AKI9 464 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 SCN2BO60939 215 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 ULK1O75385 1050 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 ZNF254O75437 659 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 IGLV3-25P01717 112 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 SYPP08247 313 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 EBLN1P0CF75 366 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 PEPDP12955 493 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 SOX3P41225 446 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 RAG2P55895 527 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 SLC7A9P82251 487 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 PUDPQ08623 228 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 ZNF169Q14929 603 aaPredicted RBP9.54□□□□□ -0.88
APTX-216ENST00000472896 TEAD4Q15561 434 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 LGALSLQ3ZCW2 172 aaPredicted RBP9.54□□□□□ -0.88
APTX-216ENST00000472896 PLA1AQ53H76 456 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 C3orf38Q5JPI3 329 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 CNIH2Q6PI25 160 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 SLC36A4Q6YBV0 504 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 ZNF551Q7Z340 670 aaPredicted RBP9.54□□□□□ -0.88
APTX-216ENST00000472896 GPR155Q7Z3F1 870 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 GLCCI1Q86VQ1 547 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 PTOV1Q86YD1 416 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 LGI4Q8N135 537 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 UXS1Q8NBZ7 420 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 USP7Q93009 1102 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 OTUB1Q96FW1 271 aaPredicted RBP9.54□□□□□ -0.88
APTX-216ENST00000472896 WBP1Q96G27 269 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 HSPA12BQ96MM6 686 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 FOPNLQ96NB1 174 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 TRIB3Q96RU7 358 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 ZNF436Q9C0F3 470 aaPredicted RBP9.54□□□□□ -0.88
APTX-216ENST00000472896 GHITMQ9H3K2 345 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 IL21RQ9HBE5 538 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 MCCC2Q9HCC0 563 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 EMC3Q9P0I2 261 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 KLHL42Q9P2K6 505 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 FTSJ1Q9UET6 329 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 SCP2D1Q9UJQ7 156 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 COPS3Q9UNS2 423 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 ASB1Q9Y576 335 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 NUBP2Q9Y5Y2 271 aa9.54□□□□□ -0.88
APTX-216ENST00000472896 LOC102723532A0A0G2JNH3 316 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 ZNF840PA6NDX5 716 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 TRABD2BA6NFA1 517 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 PRSS44E7EML9 344 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 MANBAO00462 879 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 CASC3O15234 703 aaKnown RBP9.53□□□□□ -0.88
APTX-216ENST00000472896 SULT1B1O43704 296 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 PRMT3O60678 531 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 B3GALNT1O75752 331 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 ADRA2AP08913 450 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 CTPS1P17812 591 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 PRPH2P23942 346 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 FGF9P31371 208 aaPredicted RBP9.53□□□□□ -0.88
APTX-216ENST00000472896 PCGF2P35227 344 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 HSPA7P48741 367 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 ZNF81P51508 661 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 CRISP1P54107 249 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 DSC2Q02487 901 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 MXD1Q05195 221 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 SRSF11Q05519 484 aaKnown RBP9.53□□□□□ -0.88
APTX-216ENST00000472896 EIF4EBP2Q13542 120 aaPredicted RBP9.53□□□□□ -0.88
APTX-216ENST00000472896 IL18Q14116 193 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 PTGES3Q15185 160 aaKnown RBP9.53□□□□□ -0.88
APTX-216ENST00000472896 ZMYND11Q15326 602 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 C4orf46Q504U0 113 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 LY6G5CQ5SRR4 150 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 ZNF57Q68EA5 555 aaPredicted RBP9.53□□□□□ -0.88
APTX-216ENST00000472896 MSANTD2Q6P1R3 559 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 BHLHA9Q7RTU4 235 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 TMPRSS7Q7RTY8 843 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 SPATA2LQ8IUW3 424 aaPredicted RBP9.53□□□□□ -0.88
APTX-216ENST00000472896 BBS7Q8IWZ6 715 aa9.53□□□□□ -0.88
APTX-216ENST00000472896 RGL4Q8IZJ4 473 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms