RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ABCB1P08183 1280 aaPredicted RBP14.07□□□□□ -0.16
SDC3-203ENST00000471567 CCL3P10147 92 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 IDO1P14902 403 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 CDK9P50750 372 aaKnown RBP14.07□□□□□ -0.16
SDC3-203ENST00000471567 TDGF1P3P51864 188 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 PMP22Q01453 160 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 ALDH6A1Q02252 535 aaKnown RBP14.07□□□□□ -0.16
SDC3-203ENST00000471567 ZNF155Q12901 538 aaPredicted RBP14.07□□□□□ -0.16
SDC3-203ENST00000471567 RPS6KA2Q15349 733 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 ZNHIT3Q15649 155 aaPredicted RBP14.07□□□□□ -0.16
SDC3-203ENST00000471567 PGS1Q32NB8 556 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 TBCELQ5QJ74 424 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 TMEM64Q6YI46 380 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 GK5Q6ZS86 529 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 FAM47EQ6ZV65 393 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 NUP54Q7Z3B4 507 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 FBXW8Q8N3Y1 598 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 CPSF7Q8N684 471 aaKnown RBP14.07□□□□□ -0.16
SDC3-203ENST00000471567 FAM13CQ8NE31 585 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 OR2M7Q8NG81 312 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 OR10G3Q8NGC4 313 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 OMA1Q96E52 524 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 MAGED4Q96JG8 741 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 LMF2Q9BU23 707 aaKnown RBP14.07□□□□□ -0.16
SDC3-203ENST00000471567 DEPPQ9NTK1 212 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 GPR45Q9Y5Y3 372 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 ANKUB1A6NFN9 424 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 PYCARD-AS1I3L0S3 204 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 RNASET2O00584 256 aaKnown RBP14.06□□□□□ -0.16
SDC3-203ENST00000471567 ABCB7O75027 752 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 ZNF24P17028 368 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 EFNA1P20827 205 aaPredicted RBP14.06□□□□□ -0.16
SDC3-203ENST00000471567 MST1P26927 711 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 KIR3DL1P43629 444 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 CORO7P57737 925 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 FBXW4P57775 412 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 GPR85P60893 370 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 PRR5P85299 388 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 PSG6Q00889 435 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 KCNC4Q03721 635 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 PLCXD2Q0VAA5 305 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 ELOAQ14241 798 aaKnown RBP14.06□□□□□ -0.16
SDC3-203ENST00000471567 NNATQ16517 81 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 GSTA3Q16772 222 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 CYP27C1Q4G0S4 372 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 KRTCAP3Q53RY4 240 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 ANXA8L1Q5VT79 327 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 TMEM81Q6P7N7 255 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 ZCCHC12Q6PEW1 402 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 NPSR1Q6W5P4 371 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 BNC2Q6ZN30 1099 aaPredicted RBP14.06□□□□□ -0.16
SDC3-203ENST00000471567 ACAD11Q709F0 780 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 SLC44A2Q8IWA5 706 aaPredicted RBP14.06□□□□□ -0.16
SDC3-203ENST00000471567 PRR22Q8IZ63 422 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 VPS37AQ8NEZ2 397 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 NUP43Q8NFH3 380 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 SPPL2AQ8TCT8 520 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 NUDT8Q8WV74 236 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 HOXB13Q92826 284 aaPredicted RBP14.06□□□□□ -0.16
SDC3-203ENST00000471567 MS4A4EQ96PG1 132 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 OR52B2Q96RD2 323 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 CLMPQ9H6B4 373 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 NEUROD4Q9HD90 331 aa14.06□□□□□ -0.16
SDC3-203ENST00000471567 SIRT3Q9NTG7 399 aaPredicted RBP14.06□□□□□ -0.16
SDC3-203ENST00000471567 CNOT11Q9UKZ1 510 aaKnown RBP14.06□□□□□ -0.16
SDC3-203ENST00000471567 PRRC2CQ9Y520 2896 aaKnown RBP14.06□□□□□ -0.16
SDC3-203ENST00000471567 HELZ2Q9BYK8 2649 aaKnown RBP14.06□□□□□ -0.16
SDC3-203ENST00000471567 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 PRSS51A0A1B0GVH4 220 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 OR6C70A6NIJ9 312 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 E9PBE3 544 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 UBDO15205 165 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 NME6O75414 186 aaPredicted RBP14.05□□□□□ -0.16
SDC3-203ENST00000471567 C6orf47O95873 294 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 GNLYP22749 145 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 WNT3P56703 355 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 MRPS22P82650 360 aaKnown RBP14.05□□□□□ -0.16
SDC3-203ENST00000471567 VPS26BQ4G0F5 336 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 PDCD4Q53EL6 469 aaKnown RBP14.05□□□□□ -0.16
SDC3-203ENST00000471567 OR4F3Q6IEY1 312 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 SIAH3Q8IW03 269 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 CDRT4Q8N9R6 151 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 GLB1L3Q8NCI6 653 aaPredicted RBP14.05□□□□□ -0.16
SDC3-203ENST00000471567 OR5M3Q8NGP4 307 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 STON2Q8WXE9 905 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 DIO2Q92813 273 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 HGDQ93099 445 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 TMBIM1Q969X1 311 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 MOAP1Q96BY2 351 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 FAM120BQ96EK7 910 aaKnown RBP14.05□□□□□ -0.16
SDC3-203ENST00000471567 GIMAP5Q96F15 307 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 SLC35A4Q96G79 324 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 ZBTB18Q99592 522 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 CCDC28BQ9BUN5 200 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 IL1RL2Q9HB29 575 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 Q9N2J8 555 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 TCF7L2Q9NQB0 619 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 OR10H1Q9Y4A9 318 aa14.05□□□□□ -0.16
SDC3-203ENST00000471567 ACOT7O00154 380 aa14.04□□□□□ -0.16
SDC3-203ENST00000471567 POLR3GO15318 223 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms