RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 MTERF3Q96E29 417 aa11.4□□□□□ -0.58
LINC00888-202ENST00000471496 ELP4Q96EB1 424 aa11.4□□□□□ -0.58
LINC00888-202ENST00000471496 VSTM2LQ96N03 204 aa11.4□□□□□ -0.58
LINC00888-202ENST00000471496 PROK2Q9HC23 129 aa11.4□□□□□ -0.58
LINC00888-202ENST00000471496 MARCOQ9UEW3 520 aaPredicted RBP11.4□□□□□ -0.58
LINC00888-202ENST00000471496 VPS4AQ9UN37 437 aa11.4□□□□□ -0.58
LINC00888-202ENST00000471496 ERVK-11Q9UQG0 969 aa11.4□□□□□ -0.58
LINC00888-202ENST00000471496 GPR55Q9Y2T6 319 aaPredicted RBP11.4□□□□□ -0.58
LINC00888-202ENST00000471496 KLF13Q9Y2Y9 288 aaPredicted RBP11.4□□□□□ -0.58
LINC00888-202ENST00000471496 CHCHD2Q9Y6H1 151 aaPredicted RBP11.4□□□□□ -0.58
LINC00888-202ENST00000471496 GTF3C1Q12789 2109 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 UPK1AO00322 258 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 ANKRD28O15084 1053 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 HDAC3O15379 428 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 PDPK1O15530 556 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 PEX1O43933 1283 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 SLITRK5O94991 958 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 CRYABP02511 175 aaKnown RBP11.39□□□□□ -0.59
LINC00888-202ENST00000471496 IFI6P09912 130 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 CT45A8P0DMV1 189 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 CT45A9P0DMV2 189 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 LAMP1P11279 417 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 EDN3P14138 238 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 DRD5P21918 477 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 ABCD3P28288 659 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 PPICP45877 212 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 MEOX1P50221 254 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 NNATQ16517 81 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 NTRK2Q16620 822 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 CT45A2Q5DJT8 189 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 OGFOD2Q6N063 350 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 TMEM107Q6UX40 140 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 NPSR1Q6W5P4 371 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 LRRC34Q8IZ02 419 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 OR2L13Q8N349 312 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 OR10G3Q8NGC4 313 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 PAQR8Q8TEZ7 354 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 NTNG2Q96CW9 530 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 COQ8BQ96D53 544 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 SGCZQ96LD1 299 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 BTBD9Q96Q07 612 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 NOP53Q9NZM5 478 aaKnown RBP11.39□□□□□ -0.59
LINC00888-202ENST00000471496 SH3BP4Q9P0V3 963 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 C19orf53Q9UNZ5 99 aaPredicted RBP11.39□□□□□ -0.59
LINC00888-202ENST00000471496 NPFFR2Q9Y5X5 522 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 FREM3P0C091 2139 aa11.39□□□□□ -0.59
LINC00888-202ENST00000471496 G3V3Y1 287 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 TO15178 435 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 BCAS2O75934 225 aaPredicted RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 ALDOCP09972 364 aaKnown RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 KITP10721 976 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 EFNA1P20827 205 aaPredicted RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 CNR1P21554 472 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 NTSP30990 170 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 RFC3P40938 356 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 CDK9P50750 372 aaKnown RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 CLDN8P56748 225 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 CORO7P57737 925 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 PPP2R2AP63151 447 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 FOXO1Q12778 655 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 MAD2L1Q13257 205 aaPredicted RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 HLA-DQA1Q5Y7H0 255 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 PRR22Q8IZ63 422 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 OR2M7Q8NG81 312 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 LCORQ96JN0 433 aaPredicted RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 MAELQ96JY0 434 aaKnown RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 CLMPQ9H6B4 373 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 WDR55Q9H6Y2 383 aaPredicted RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 FOLH1BQ9HBA9 442 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 SLCO1B3Q9NPD5 702 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 SIRT3Q9NTG7 399 aaPredicted RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 ACSS1Q9NUB1 689 aaPredicted RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 NTMQ9P121 344 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 PRODH2Q9UF12 536 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 CNOT11Q9UKZ1 510 aaKnown RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 EIF3LQ9Y262 564 aaKnown RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 CFL2Q9Y281 166 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 ZNF407Q9C0G0 2248 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 ANKUB1A6NFN9 424 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 FRG2CA6NGY1 282 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 KLRC4-KLRK1H3BQV0 150 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 ABCB1P08183 1280 aaPredicted RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 LBPP18428 481 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 PRPS1L1P21108 318 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 EPHA3P29320 983 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 HPCAL1P37235 193 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 PIGAP37287 484 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 FBXW4P57775 412 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 DCAF7P61962 342 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 PSG6Q00889 435 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 HSPB3Q12988 150 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 MLC1Q15049 377 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 EIF2S3LQ2VIR3 472 aaKnown RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 OXLD1Q5BKU9 147 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 SLC22A10Q63ZE4 541 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 R3HCC1LQ7Z5L2 792 aaKnown RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 CAMKMTQ7Z624 323 aa11.38□□□□□ -0.59
LINC00888-202ENST00000471496 CHERPQ8IWX8 916 aaKnown RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 DND1Q8IYX4 353 aaKnown RBP11.38□□□□□ -0.59
LINC00888-202ENST00000471496 TAGAPQ8N103 731 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms