RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TMEM45BQ96B21 275 aa2.96□□□□□ -1.94
BRCA2-202ENST00000470094 CNOT6LQ96LI5 555 aaKnown RBP2.96□□□□□ -1.94
BRCA2-202ENST00000470094 CBWD1Q9BRT8 395 aa2.96□□□□□ -1.94
BRCA2-202ENST00000470094 THUMPD2Q9BTF0 503 aaKnown RBP2.96□□□□□ -1.94
BRCA2-202ENST00000470094 SLC26A1Q9H2B4 701 aa2.96□□□□□ -1.94
BRCA2-202ENST00000470094 COQ10BQ9H8M1 238 aa2.96□□□□□ -1.94
BRCA2-202ENST00000470094 ACTR8Q9H981 624 aa2.96□□□□□ -1.94
BRCA2-202ENST00000470094 DHRS4-AS1Q9P1J3 65 aa2.96□□□□□ -1.94
BRCA2-202ENST00000470094 ARMCX1Q9P291 453 aa2.96□□□□□ -1.94
BRCA2-202ENST00000470094 ENTPD4Q9Y227 616 aa2.96□□□□□ -1.94
BRCA2-202ENST00000470094 SLC6A5Q9Y345 797 aa2.96□□□□□ -1.94
BRCA2-202ENST00000470094 ATRXP46100 2492 aa2.96□□□□□ -1.94
BRCA2-202ENST00000470094 A0A1W2PQ72 361 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 ZNF487B1APH4 448 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 ANGPT2O15123 496 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 CHADO15335 359 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 ZNF253O75346 499 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 PIGRP01833 764 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 IGHDP01880 384 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 APRTP07741 180 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 HIST1H2AGP0C0S8 130 aaPredicted RBP2.95□□□□□ -1.94
BRCA2-202ENST00000470094 RALAP11233 206 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 HSD17B1P14061 328 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 FOSL2P15408 326 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 GNSP15586 552 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 PPP2R1BP30154 601 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 PRDX2P32119 198 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 SLC6A8P48029 635 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 IST1P53990 364 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 MTTPP55157 894 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 EMC2Q15006 297 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 ZNF528Q3MIS6 628 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 AGKQ53H12 422 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 MARC1Q5VT66 337 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 LIPKQ5VXJ0 399 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 SLC25A24Q6NUK1 477 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 YRDCQ86U90 279 aaKnown RBP2.95□□□□□ -1.94
BRCA2-202ENST00000470094 ZNF573Q86YE8 665 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.95□□□□□ -1.94
BRCA2-202ENST00000470094 PARP8Q8N3A8 854 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 BCORP1Q8N888 145 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 OR52B4Q8NGK2 314 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 OR1K1Q8NGR3 316 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 FLVCR1-AS1Q8TAF5 88 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 GOLGA5Q8TBA6 731 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 MRAPQ8TCY5 172 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 HIST1H2ACQ93077 130 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 RAB7BQ96AH8 199 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 DTNBP1Q96EV8 351 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 VPS39Q96JC1 886 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 ELL3Q9HB65 397 aaPredicted RBP2.95□□□□□ -1.94
BRCA2-202ENST00000470094 EIF3KQ9UBQ5 218 aaKnown RBP2.95□□□□□ -1.94
BRCA2-202ENST00000470094 B4GALT7Q9UBV7 327 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 KIF3AQ9Y496 699 aa2.95□□□□□ -1.94
BRCA2-202ENST00000470094 ZMYM6O95789 1325 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 NCAPD2Q15021 1401 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 A0A1B0GWJ7 208 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 FAM230AA0A1W2PPH8 454 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 SH3PXD2BA1X283 911 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 RNF212BA8MTL3 300 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 E2F3O00716 465 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 MCF2LO15068 1137 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 SRPX2O60687 465 aaPredicted RBP2.94□□□□□ -1.94
BRCA2-202ENST00000470094 KRT8P05787 483 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 FCGR3AP08637 254 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 HSPA5P11021 654 aaKnown RBP2.94□□□□□ -1.94
BRCA2-202ENST00000470094 UMPSP11172 480 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 CALML3P27482 149 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 PTPN4P29074 926 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 MAGEA4P43358 317 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 ELP6Q0PNE2 266 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 NME3Q13232 169 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 ABRAXAS2Q15018 415 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 CNPY1Q3B7I2 92 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 ANKDD1AQ495B1 522 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 DCAF12Q5T6F0 453 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 FHL5Q5TD97 284 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 RSBN1Q5VWQ0 802 aaPredicted RBP2.94□□□□□ -1.94
BRCA2-202ENST00000470094 RTL6Q6ICC9 239 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 CCBE1Q6UXH8 406 aaPredicted RBP2.94□□□□□ -1.94
BRCA2-202ENST00000470094 ZNF600Q6ZNG1 722 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 Q6ZRG5 221 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 ARMCX2Q7L311 632 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 PPP1R42Q7Z4L9 355 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 ITIH5Q86UX2 942 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 TBC1D21Q8IYX1 336 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 GMCL1P1Q8NEA9 526 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 PHYHIPQ92561 330 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 FCGR1BQ92637 280 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 P3H4Q92791 437 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 MCCC1Q96RQ3 725 aaPredicted RBP2.94□□□□□ -1.94
BRCA2-202ENST00000470094 ZNF416Q9BWM5 594 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 SLITRK2Q9H156 845 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 ZBP1Q9H171 429 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 CXXC4Q9H2H0 198 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 HPS4Q9NQG7 708 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.94□□□□□ -1.94
BRCA2-202ENST00000470094 ABCC13Q9NSE7 274 aa2.94□□□□□ -1.94
BRCA2-202ENST00000470094 CENPMQ9NSP4 180 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms