RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 KIF18BQ86Y91 864 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 NOA1Q8NC60 698 aaKnown RBP15.94■□□□□ 0.14
COL7A1-208ENST00000470076 SIMC1Q8NDZ2 872 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 MNS1Q8NEH6 495 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 GOT1L1Q8NHS2 421 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-208ENST00000470076 ZPLD1Q8TCW7 415 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 ZNF675Q8TD23 568 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 C16orf45Q96MC5 204 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-208ENST00000470076 HBEGFQ99075 208 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 CCM2LQ9NUG4 571 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-208ENST00000470076 MCM8Q9UJA3 840 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 UTS2RQ9UKP6 389 aa15.94■□□□□ 0.14
COL7A1-208ENST00000470076 EXO1Q9UQ84 846 aaKnown RBP15.94■□□□□ 0.14
COL7A1-208ENST00000470076 EXOC1LA0A1B0GW35 172 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 PRAMEF25A6NGN4 478 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 FRG2CA6NGY1 282 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 OR6C70A6NIJ9 312 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 MANBAO00462 879 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 UGT2B11O75310 529 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 SUPT7LO94864 414 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 ESRRBO95718 433 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 IL18BPO95998 194 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 CYP4B1P13584 511 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 DRD2P14416 443 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 CPN1P15169 458 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 PCSK2P16519 638 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 MRPS35P82673 323 aaKnown RBP15.93■□□□□ 0.14
COL7A1-208ENST00000470076 DAZAP2Q15038 168 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-208ENST00000470076 LTB4RQ15722 352 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 GLE1Q53GS7 698 aaKnown RBP15.93■□□□□ 0.14
COL7A1-208ENST00000470076 DESI1Q6ICB0 168 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 LCA5Q86VQ0 697 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 SAMD14Q8IZD0 417 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-208ENST00000470076 CDYL2Q8N8U2 506 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 GBP7Q8N8V2 638 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-208ENST00000470076 CHDHQ8NE62 594 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-208ENST00000470076 UHMK1Q8TAS1 419 aaKnown RBP15.93■□□□□ 0.14
COL7A1-208ENST00000470076 TMCO6Q96DC7 493 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 ERP27Q96DN0 273 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 ZNF382Q96SR6 550 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 EPB41L4BQ9H329 900 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 GALNT9Q9HCQ5 603 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 SERHLQ9NQF3 203 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 CBLCQ9ULV8 474 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 MAPRE3Q9UPY8 281 aa15.93■□□□□ 0.14
COL7A1-208ENST00000470076 GPR55Q9Y2T6 319 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-208ENST00000470076 NIPBLQ6KC79 2804 aaeCLIP15.93■□□□□ 0.14
COL7A1-208ENST00000470076 ACANP16112 2415 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 C2orf72A6NCS6 295 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 TUBAL3A6NHL2 446 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 ABCB7O75027 752 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 ULK1O75385 1050 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 TACR1P25103 407 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 PSPHP78330 225 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 SORDQ00796 357 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 UNC50Q53HI1 259 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 ZNF628Q5EBL2 1059 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 TCHHL1Q5QJ38 904 aaPredicted RBP15.92■□□□□ 0.14
COL7A1-208ENST00000470076 ZNF678Q5SXM1 525 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 FAM180BQ6P0A1 224 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 ENPP6Q6UWR7 440 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 TIFABQ6ZNK6 161 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 GPRIN3Q6ZVF9 776 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 CDC20BQ86Y33 519 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 WDSUB1Q8N9V3 476 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 OR14L1PQ8NHC6 308 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 METTL6Q8TCB7 284 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 MTBPQ96DY7 904 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 DTNBP1Q96EV8 351 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 COL21A1Q96P44 957 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 BTBD9Q96Q07 612 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 TMUB1Q9BVT8 246 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 OR2B2Q9GZK3 357 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 LIME1Q9H400 295 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 PFDN4Q9NQP4 134 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 EHD3Q9NZN3 535 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 JKAMPQ9P055 326 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 HEY2Q9UBP5 337 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 DLGAP4Q9Y2H0 992 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 STK38LQ9Y2H1 464 aa15.92■□□□□ 0.14
COL7A1-208ENST00000470076 GNG14A0A1W2PPG7 69 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 EEF1E1-BLOC1S5C9J1V9 151 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 EEF1E1O43324 174 aaKnown RBP15.91■□□□□ 0.14
COL7A1-208ENST00000470076 PCDH7O60245 1069 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 REM1O75628 298 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 IL3P08700 152 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 ABHD2P08910 425 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 EPXP11678 715 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 CD99P14209 185 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 DNASE1P24855 282 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 HMOX2P30519 316 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 HEPACAMQ14CZ8 416 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 SPIN4Q56A73 249 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 CCDC116Q8IYX3 515 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 C9orf106Q8NAJ2 232 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 TMBIM1Q969X1 311 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 SLC35A4Q96G79 324 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 ZFP3Q96NJ6 502 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 TMEM237Q96Q45 408 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 GIMAP4Q9NUV9 329 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms