RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PRMT9Q6P2P2 845 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ZNF549Q6P9A3 640 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 AGTRAPQ6RW13 159 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 SUSD1Q6UWL2 747 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ABHD13Q7L211 337 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 TRIM73Q86UV7 250 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ZFAND4Q86XD8 727 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 PAQR4Q8N4S7 273 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 CCDC63Q8NA47 563 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 CAMKVQ8NCB2 501 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 TRPV3Q8NET8 790 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 OR2L3Q8NG85 312 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 PPP4R1Q8TF05 950 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 FBXL8Q96CD0 374 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 IL17FQ96PD4 163 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 DPH7Q9BTV6 452 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 HDHD5Q9BXW7 423 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 SEMA4CQ9C0C4 833 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ATG10Q9H0Y0 220 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 STMN4Q9H169 189 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ZDHHC18Q9NUE0 388 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ARGLU1Q9NWB6 273 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 TMEM160Q9NX00 188 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 EURLQ9NYK6 297 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 NINJ2Q9NZG7 142 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 NUDT4Q9NZJ9 180 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 STOX2Q9P2F5 926 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 OPTCQ9UBM4 332 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 CIDEBQ9UHD4 219 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 PDE10AQ9Y233 779 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 TMEM184BQ9Y519 407 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-208ENST00000469585 SPACA6W5XKT8 324 aa5.88□□□□□ -1.47
PTCD3-208ENST00000469585 ASXL3Q9C0F0 2248 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 CACNA1AO00555 2505 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 A0A096LPK6 155 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 A0A0J9YVX5 310 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 SLC22A23A1A5C7 686 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 MCIDASD6RGH6 385 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 PSMD12O00232 456 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-208ENST00000469585 ZNF749O43361 778 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 CRCPO75575 148 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 STK16O75716 305 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 PVRP15151 417 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 TFEBP19484 476 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 TNFRSF8P28908 595 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 MPGP29372 298 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 SERPINB1P30740 379 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 ETV5P41161 510 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 CCR10P46092 362 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 TAS2R39P59534 338 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 NAA20P61599 178 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 STXBP1P61764 594 aaKnown RBP5.87□□□□□ -1.47
PTCD3-208ENST00000469585 HSF1Q00613 529 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 RBBP5Q15291 538 aaKnown RBP5.87□□□□□ -1.47
PTCD3-208ENST00000469585 TGFBIQ15582 683 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 TSNQ15631 228 aaKnown RBP5.87□□□□□ -1.47
PTCD3-208ENST00000469585 PDK4Q16654 411 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 DEFB110Q30KQ9 67 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 GARNL3Q5VVW2 1013 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 MLIPQ5VWP3 458 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 TTC19Q6DKK2 380 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-208ENST00000469585 PWWP2BQ6NUJ5 590 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 MTFR2Q6P444 385 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 EMBQ6PCB8 327 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 LCTLQ6UWM7 567 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 CDHR3Q6ZTQ4 885 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 LRRC70Q7Z2Q7 622 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 SYVN1Q86TM6 617 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 RIBC1Q8N443 379 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-208ENST00000469585 CSNK1A1LQ8N752 337 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 BMPERQ8N8U9 685 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 CLEC1AQ8NC01 280 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 PPFIBP2Q8ND30 876 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 C7orf57Q8NEG2 295 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 SLC44A1Q8WWI5 657 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 METTL21AQ8WXB1 218 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 STARD8Q92502 1023 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 ZNF501Q96CX3 271 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-208ENST00000469585 CCDC126Q96EE4 140 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 LRFN5Q96NI6 719 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 OLFM1Q99784 485 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 COPS7BQ9H9Q2 264 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-208ENST00000469585 ANKHQ9HCJ1 492 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 LHX9Q9NQ69 397 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 CUTCQ9NTM9 273 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 DNAJC11Q9NVH1 559 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 SPHK1Q9NYA1 384 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 PTGFRNQ9P2B2 879 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 CPSF2Q9P2I0 782 aaKnown RBP5.87□□□□□ -1.47
PTCD3-208ENST00000469585 KLHL13Q9P2N7 655 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 FETUBQ9UGM5 382 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 PILRAQ9UKJ1 303 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 STK38LQ9Y2H1 464 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 PSAT1Q9Y617 370 aa5.87□□□□□ -1.47
PTCD3-208ENST00000469585 HYKKA2RU49 373 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 SYNDIG1LA6NDD5 238 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 SMIM23A6NLE4 172 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 MKRN2OSH3BPM6 223 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 MASP2O00187 686 aa5.86□□□□□ -1.47
PTCD3-208ENST00000469585 RIPK2O43353 540 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms