RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 NDUFV2P19404 249 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 CD22P20273 847 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 PRKACBP22694 351 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 ITPKAP23677 461 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 FGF9P31371 208 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-205ENST00000469550 MAPK8P45983 427 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 CSNK1DP48730 415 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 STK19P49842 368 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-205ENST00000469550 SGSHP51688 502 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 RPL6Q02878 288 aaKnown RBP9.05□□□□□ -0.96
HDAC3-205ENST00000469550 HSPA14Q0VDF9 509 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 TPBGQ13641 420 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.05□□□□□ -0.96
HDAC3-205ENST00000469550 COX20Q5RI15 118 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 PLEKHS1Q5SXH7 462 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 ADGRF1Q5T601 910 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 TRIQKQ629K1 86 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 SDE2Q6IQ49 451 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 GRHL2Q6ISB3 625 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 PAMR1Q6UXH9 720 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 LINGO4Q6UY18 593 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 SLC51BQ86UW2 128 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 DENND1CQ8IV53 801 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 FAM20CQ8IXL6 584 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 KLHDC8AQ8IYD2 350 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 FAM26EQ8N5C1 309 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 LSMEM1Q8N8F7 131 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 TP53I13Q8NBR0 393 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-205ENST00000469550 NFKBIDQ8NI38 313 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 IL4I1Q96RQ9 567 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 LYSMD1Q96S90 227 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 KCNJ15Q99712 375 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 COQ7Q99807 217 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 ZDHHC4Q9NPG8 344 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 TEKT2Q9UIF3 430 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 PRELID1Q9Y255 219 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 ASB4Q9Y574 426 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 PCNX2A6NKB5 2137 aa9.05□□□□□ -0.96
HDAC3-205ENST00000469550 TRBC2A0A5B9 178 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 IRGMA1A4Y4 181 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 MGAT4DA6NG13 374 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 PRRT4C9JH25 899 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 NEDD8-MDP1E9PL57 170 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 WWP2O00308 870 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 KPNA5O15131 536 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 LYRM1O43325 122 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 SOCS5O75159 536 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 STC2O76061 302 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 KLKB1P03952 638 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 FHP07954 510 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ARAFP10398 606 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 HNF1BP35680 557 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 RPL3P39023 403 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 GSTM5P46439 218 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 TGM4P49221 684 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 DGKGP49619 791 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 MAN2A2P49641 1150 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 BTG1P62324 171 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ALDH6A1Q02252 535 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 MXD1Q05195 221 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 HEPACAMQ14CZ8 416 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 UAP1L1Q3KQV9 507 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ZNF648Q5T619 568 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ZBTB37Q5TC79 503 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 LIPKQ5VXJ0 399 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CASP12Q6UXS9 341 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 TPGS1Q6ZTW0 290 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 USP30Q70CQ3 517 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 LAPTM4BQ86VI4 370 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 AMIGO1Q86WK6 493 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 TAGAPQ8N103 731 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 GHDCQ8N2G8 530 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 RNF175Q8N4F7 328 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ATP6V1C2Q8NEY4 427 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 CREB3L1Q96BA8 519 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ZBED6CLQ96FA7 236 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 SLC6A18Q96N87 628 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 QRFPRQ96P65 431 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 DCLRE1CQ96SD1 692 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 SLC35A5Q9BS91 424 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 TMEM43Q9BTV4 400 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 KATNB1Q9BVA0 655 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 TSSK6Q9BXA6 273 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 REEP4Q9H6H4 257 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 NT5DC2Q9H857 520 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 MRPS18AQ9NVS2 196 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 PTTG3PQ9NZH4 202 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 TESQ9UGI8 421 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 SUSD2Q9UGT4 822 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 ANGPT4Q9Y264 503 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 GSTK1Q9Y2Q3 226 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 SF3B6Q9Y3B4 125 aaKnown RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 MUC22E2RYF6 1773 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-205ENST00000469550 FAM240BA0A1B0GVZ2 78 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 TMEM129A0AVI4 362 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 FAAHO00519 579 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 PDPK1O15530 556 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 AKR7A2O43488 359 aa9.04□□□□□ -0.96
HDAC3-205ENST00000469550 RAB36O95755 333 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms