RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 ENO3P13929 434 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 GDNFP39905 211 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 SLC1A2P43004 574 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 MSH2P43246 934 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 NPY2RP49146 381 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 LHX2P50458 406 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 SUCLG1P53597 346 aaKnown RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 DIO3P55073 304 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 CDKN2DP55273 166 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 SLC37A1P57057 533 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 RPS4XP62701 263 aaKnown RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF844Q08AG5 666 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 EBPQ15125 230 aaKnown RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 TSC22D1Q15714 1073 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 EXOC3L2Q2M3D2 409 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 PGGHGQ32M88 737 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 TTLL9Q3SXZ7 439 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 C18orf63Q68DL7 685 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 DUPD1Q68J44 220 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 TIGD3Q6B0B8 471 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 GALNT18Q6P9A2 607 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 ABHD17CQ6PCB6 329 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 ANGPTL8Q6UXH0 198 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 CAND1Q86VP6 1230 aaKnown RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 THOC6Q86W42 341 aaKnown RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 GRAMD2AQ8IUY3 354 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 SLC15A4Q8N697 577 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 LRRC57Q8N9N7 239 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 WDSUB1Q8N9V3 476 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 TRPV3Q8NET8 790 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 GABPB2Q8TAK5 448 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 CHAC2Q8WUX2 184 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 KCNJ9Q92806 393 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 LINGO1Q96FE5 620 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF845Q96IR2 970 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 FAR2Q96K12 515 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 TNFRSF13CQ96RJ3 184 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 HAUS8Q9BT25 410 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 NPLQ9BXD5 320 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 AMBRA1Q9C0C7 1298 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 WWTR1Q9GZV5 400 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 ESRP2Q9H6T0 727 aaKnown RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 PELI2Q9HAT8 420 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 GALNT9Q9HCQ5 603 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 MBNL3Q9NUK0 354 aaKnown RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 ARL15Q9NXU5 204 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 SLC17A6Q9P2U8 582 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF490Q9ULM2 529 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 REXO2Q9Y3B8 237 aaKnown RBP4.74□□□□□ -1.65
PTPN4-209ENST00000469511 IKBKGQ9Y6K9 419 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 X6R8D5 127 aa4.74□□□□□ -1.65
PTPN4-209ENST00000469511 URADA6NGE7 173 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 CDC7O00311 574 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 SAP18O00422 153 aaKnown RBP4.73□□□□□ -1.65
PTPN4-209ENST00000469511 HCRTR2O43614 444 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 OR10H2O60403 315 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 LMX1BO60663 402 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ICOSLGO75144 302 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 NME6O75414 186 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-209ENST00000469511 FTCDO95954 541 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ACTL6AO96019 429 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 C8GP07360 202 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ABCB1P08183 1280 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-209ENST00000469511 CT62P0C5K7 136 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 IGHV4-31P0DP07 118 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF708P17019 499 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ITGA2P17301 1181 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 CD22P20273 847 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 TBXA2RP21731 343 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 CCND1P24385 295 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 GRK2P25098 689 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 SERPINB3P29508 390 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 STT3AP46977 705 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 KCNJ1P48048 391 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 KCNJ5P48544 419 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 MTTPP55157 894 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 CASP9P55211 416 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 B3GALT5-AS1P59052 145 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 STXBP1P61764 594 aaKnown RBP4.73□□□□□ -1.65
PTPN4-209ENST00000469511 SKP1P63208 163 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 IGLV3-21P80748 117 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-209ENST00000469511 FUT7Q11130 342 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 GPS1Q13098 491 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF267Q14586 743 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ZNF460Q14592 562 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 SF3B4Q15427 424 aaKnown RBP eCLIP4.73□□□□□ -1.65
PTPN4-209ENST00000469511 NNATQ16517 81 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 CYP1B1Q16678 543 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ADPRMQ3LIE5 342 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 PDLIM3Q53GG5 364 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-209ENST00000469511 BEX5Q5H9J7 111 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 FAM120AOSQ5T036 256 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 ANKRD22Q5VYY1 191 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 OR5M10Q6IEU7 315 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 NIPAL1Q6NVV3 410 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 BHLHB9Q6PI77 547 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 STAC2Q6ZMT1 411 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 UBQLNLQ8IYU4 475 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 LILRA2Q8N149 483 aa4.73□□□□□ -1.65
PTPN4-209ENST00000469511 OR2L5Q8NG80 312 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms