RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ZNF691Q5VV52 312 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 DHRS4L2Q6PKH6 230 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 DEF8Q6ZN54 512 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 KANSL1Q7Z3B3 1105 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 OR4N5Q8IXE1 308 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 PEX5LQ8IYB4 626 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 D2HGDHQ8N465 521 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 COX18Q8N8Q8 333 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 TMEM52Q8NDY8 209 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 CHDHQ8NE62 594 aaPredicted RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 PRSS33Q8NF86 280 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 GPR32P1Q8NGA4 272 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 SLC9A6Q92581 669 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 PIGKQ92643 395 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 HDAC2Q92769 488 aaKnown RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 CCDC74AQ96AQ1 378 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 ANKRD9Q96BM1 317 aaPredicted RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 MMABQ96EY8 250 aaPredicted RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 C16orf58Q96GQ5 468 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 SLC41A2Q96JW4 573 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 ZC3H10Q96K80 434 aaKnown RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 DHRS1Q96LJ7 313 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 PRRC1Q96M27 445 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 DGAT2Q96PD7 388 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 OR1F2PQ96R84 312 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 YIPF4Q9BSR8 244 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 SLC38A1Q9H2H9 487 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF768Q9H5H4 540 aaKnown RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 VCX3AQ9NNX9 186 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 ADAP2Q9NPF8 381 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 PAPOLBQ9NRJ5 636 aaKnown RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 CUTCQ9NTM9 273 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 ACAD8Q9UKU7 415 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 SRPK3Q9UPE1 567 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 MMACHCQ9Y4U1 282 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 GON4LQ3T8J9 2241 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 PRAMEF27A3QJZ7 478 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 HRO43593 1189 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 DYRK3O43781 588 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 PCDHGA12O60330 932 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 PRAMEF2O60811 474 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 LGI1O95970 557 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 ADAP00813 363 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 CFIP05156 583 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 H1F0P07305 194 aaKnown RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 THBS1P07996 1170 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 GUSBP08236 651 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 GIMD1P0DJR0 217 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 ACP2P11117 423 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 ATP6V1B1P15313 513 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 PRKACGP22612 351 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 CSF2RBP32927 897 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 STT3AP46977 705 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 LIMS1P48059 325 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 UGT2B15P54855 530 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 SNRPNP63162 240 aaKnown RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 POU6F2P78424 691 aaPredicted RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 BNC1Q01954 994 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 ID2Q02363 134 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 MAP4K2Q12851 820 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 TCF15Q12870 199 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 PPP1R8Q12972 351 aaKnown RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 SQSTM1Q13501 440 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 LARS2Q15031 903 aaKnown RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 DUSP7Q16829 419 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 AMZ1Q400G9 498 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 LIN52Q52LA3 116 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 FGD3Q5JSP0 725 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 EXOSC6Q5RKV6 272 aaKnown RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 DCST2Q5T1A1 773 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 NKAIN2Q5VXU1 208 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 TMEM71Q6P5X7 295 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 MED25Q71SY5 747 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 TSEN54Q7Z6J9 526 aaKnown RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 GALNT5Q7Z7M9 940 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF619Q8N2I2 560 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 PARP8Q8N3A8 854 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 Q8N9G6 341 aaPredicted RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 FAM181AQ8N9Y4 354 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 VANGL1Q8TAA9 524 aaPredicted RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 SAP25Q8TEE9 199 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 CDS1Q92903 461 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 CTHRC1Q96CG8 243 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 PEX11GQ96HA9 241 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 MUS81Q96NY9 551 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 ALPK1Q96QP1 1244 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 PITX2Q99697 317 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 ARHGDIGQ99819 225 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 NDC1Q9BTX1 674 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 POLR2J2Q9GZM3 115 aaKnown RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 POLR2J3Q9H1A7 115 aaKnown RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 ANKRD19PQ9H560 264 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 ARMC7Q9H6L4 198 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 MTHFD2LQ9H903 347 aaPredicted RBP8.73□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF232Q9UNY5 417 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 MGAT4BQ9UQ53 548 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 WDR45Q9Y484 360 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 GMPPBQ9Y5P6 360 aa8.73□□□□□ -1.01
SMC1A-205ENST00000469129 UNC13CQ8NB66 2214 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms