RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TINAGL1Q9GZM7 467 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 AICDAQ9GZX7 198 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 BRF2Q9HAW0 419 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 IL1RL2Q9HB29 575 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 FANCEQ9HB96 536 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 ANKHQ9HCJ1 492 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 FGF21Q9NSA1 209 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 ARL8BQ9NVJ2 186 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 AIG1Q9NVV5 245 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC39A1Q9NY26 324 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 AKAP7Q9P0M2 348 aaPredicted RBP3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 SH3BP4Q9P0V3 963 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 HCN3Q9P1Z3 774 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 RARRES3Q9UL19 164 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 DLGAP4Q9Y2H0 992 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 NAALAD2Q9Y3Q0 740 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CAPN7Q9Y6W3 813 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 MAU2Q9Y6X3 613 aa3.84□□□□□ -1.79
TMEM39A-204ENST00000468545 CABIN1Q9Y6J0 2220 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 USP34Q70CQ2 3546 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 FAM149AA5PLN7 773 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 GLOD5A6NK44 160 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 GABRR3A8MPY1 467 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 D6RAR5 112 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 PROB1E7EW31 1015 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 E9PLN8 166 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 NTN3O00634 580 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TXNDC9O14530 226 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 POLR1CO15160 346 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 PGRMC2O15173 223 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TOX3O15405 576 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ZSCAN9O15535 394 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF749O43361 778 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CHST10O43529 356 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TMPRSS11DO60235 418 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 B4GALT2O60909 372 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CSO75390 466 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 RDH16O75452 317 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ERAL1O75616 437 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 KIAA0754O94854 1291 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CBX6O95503 412 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 GP1BAP07359 652 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ELANEP08246 267 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 PRR35P0CG20 571 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 C8orf89P0DMQ9 161 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 SMIM10L1P0DMW3 83 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 THRAP10827 490 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CCL4P13236 92 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 COX7A2P14406 83 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 IDO1P14902 403 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ITIH1P19827 911 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF10P21506 573 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 HIST1H1TP22492 207 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 NR4A1P22736 598 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CPN2P22792 545 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 PRPH2P23942 346 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ATP5A1P25705 553 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ZFP36P26651 326 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 GSTM2P28161 218 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 IL12AP29459 219 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 S100A3P33764 101 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 GABRA4P48169 554 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 KCNJ5P48544 419 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ATP4BP51164 291 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 NOVA1P51513 510 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 POLR2JP52435 117 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 MTTPP55157 894 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 HNRNPH2P55795 449 aaKnown RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CLDN8P56748 225 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 KCNK10P57789 538 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 POU6F2P78424 691 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ID2Q02363 134 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ACY1Q03154 408 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ART3Q13508 389 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TRA2AQ13595 282 aaKnown RBP eCLIP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CYLC2Q14093 348 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 HABP2Q14520 560 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ZSCAN26Q16670 478 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 SYT16Q17RD7 645 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 SMU1Q2TAY7 513 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 SPDYE7PQ495Y7 208 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 VPS26BQ4G0F5 336 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CRB2Q5IJ48 1285 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 TCTE1Q5JU00 501 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 MANEAQ5SRI9 462 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 C10orf62Q5T681 223 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CPTPQ5TA50 214 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 MFSD4BQ5TF39 518 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 HES3Q5TGS1 186 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 RNF220Q5VTB9 566 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 MLIPQ5VWP3 458 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 B3GNTL1Q67FW5 361 aaPredicted RBP3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 C18orf63Q68DL7 685 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 OR4F3Q6IEY1 312 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF793Q6ZN11 406 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 RINLQ6ZS11 566 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 RNF165Q6ZSG1 346 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 RAB11FIP2Q7L804 512 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 PRSS42Q7Z5A4 293 aa3.83□□□□□ -1.8
TMEM39A-204ENST00000468545 CLNKQ7Z7G1 428 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms