RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 KLHL42Q9P2K6 505 aa10.31□□□□□ -0.76
VPS26A-204ENST00000467852 KLHL21Q9UJP4 597 aa10.31□□□□□ -0.76
VPS26A-204ENST00000467852 PDE10AQ9Y233 779 aa10.31□□□□□ -0.76
VPS26A-204ENST00000467852 PPIAL4AQ9Y536 164 aa10.31□□□□□ -0.76
VPS26A-204ENST00000467852 EFCAB8A8MWE9 144 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 SPOPO43791 374 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 ZIC3O60481 467 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 HIST1H2AGP0C0S8 130 aaPredicted RBP10.3□□□□□ -0.76
VPS26A-204ENST00000467852 HIST1H2ADP20671 130 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 MGAT1P26572 445 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 ABCD3P28288 659 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 HNRNPH1P31943 449 aaKnown RBP10.3□□□□□ -0.76
VPS26A-204ENST00000467852 PTGDSP41222 190 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 PHC1P78364 1004 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 IGLV3-21P80748 117 aaPredicted RBP10.3□□□□□ -0.76
VPS26A-204ENST00000467852 DUPD1Q68J44 220 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 SSX8Q7RTT4 187 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 REC114Q7Z4M0 266 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 GABRG1Q8N1C3 465 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 TTLQ8NG68 377 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 OR2L5Q8NG80 312 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 OR8K1Q8NGG5 319 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 SLC35G2Q8TBE7 412 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 TMEM186Q96B77 213 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 ZBTB8AQ96BR9 441 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 HIST1H2AHQ96KK5 128 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 SORCS2Q96PQ0 1159 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 OR4K3Q96R72 315 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 NODALQ96S42 347 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 HBEGFQ99075 208 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 TCF12Q99081 682 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 HIST1H2AJQ99878 128 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 H2AFJQ9BTM1 129 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 REXO4Q9GZR2 422 aaKnown RBP10.3□□□□□ -0.76
VPS26A-204ENST00000467852 PARVBQ9HBI1 364 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 LYRM4Q9HD34 91 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 HIF1ANQ9NWT6 349 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 PDP1Q9P0J1 537 aaPredicted RBP10.3□□□□□ -0.76
VPS26A-204ENST00000467852 FBXL2Q9UKC9 423 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 MAD1L1Q9Y6D9 718 aa10.3□□□□□ -0.76
VPS26A-204ENST00000467852 TIMM23O14925 209 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 FGF17O60258 216 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 PPM1BO75688 479 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 SERPING1P05155 500 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 DHRS4L1P0CG22 281 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 ALOX15P16050 662 aaPredicted RBP10.29□□□□□ -0.76
VPS26A-204ENST00000467852 NAGAP17050 411 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 B3GALT5-AS1P59052 145 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 TGM3Q08188 693 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 SP140Q13342 867 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 CTBP1Q13363 440 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 STK11Q15831 433 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 SPRED3Q2MJR0 410 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 PIWIL4Q7Z3Z4 852 aaKnown RBP10.29□□□□□ -0.76
VPS26A-204ENST00000467852 RIT1Q92963 219 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 MTBPQ96DY7 904 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 TSNARE1Q96NA8 513 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 CHRAC1Q9NRG0 131 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 DYRK1BQ9Y463 629 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 HYOU1Q9Y4L1 999 aa10.29□□□□□ -0.76
VPS26A-204ENST00000467852 GOLGA8QA0A0J9YX86 632 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 GOLGA8OA6NCC3 632 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 PRAMEF25A6NGN4 478 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 ERI2A8K979 691 aaKnown RBP10.28□□□□□ -0.76
VPS26A-204ENST00000467852 GOLGA8NF8WBI6 632 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 GOLGA8MH3BSY2 632 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 GOLGA8RI6L899 631 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 PSTPIP1O43586 416 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 PDE5AO76074 875 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 STAMBPO95630 424 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 ADAP00813 363 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 AVPP01185 164 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 C8GP07360 202 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 TUBBP07437 444 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 CPN2P22792 545 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 CCNIQ14094 377 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 ACAP2Q15057 778 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 RAET1LQ5VY80 246 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 FAHD2BQ6P2I3 314 aaPredicted RBP10.28□□□□□ -0.76
VPS26A-204ENST00000467852 NXPE4Q6UWF7 544 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 TMEM108Q6UXF1 575 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 RBMS3Q6XE24 437 aaKnown RBP10.28□□□□□ -0.76
VPS26A-204ENST00000467852 BHLHA15Q7RTS1 189 aaPredicted RBP10.28□□□□□ -0.76
VPS26A-204ENST00000467852 APTXQ7Z2E3 356 aaKnown RBP10.28□□□□□ -0.76
VPS26A-204ENST00000467852 TBC1D1Q86TI0 1168 aaPredicted RBP10.28□□□□□ -0.76
VPS26A-204ENST00000467852 ST13P4Q8IZP2 240 aaPredicted RBP10.28□□□□□ -0.76
VPS26A-204ENST00000467852 SPATA6LQ8N4H0 392 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 METTL25Q8N6Q8 603 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 BBOF1Q8ND07 529 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 OR56A3Q8NH54 315 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 OR2W6PQ8NHA6 318 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 GIMAP7Q8NHV1 300 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 MRAPQ8TCY5 172 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 HGDQ93099 445 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 FAHD2AQ96GK7 314 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 VRK1Q99986 396 aaPredicted RBP10.28□□□□□ -0.76
VPS26A-204ENST00000467852 FAM118BQ9BPY3 351 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 MAPKAP1Q9BPZ7 522 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 PELOQ9BRX2 385 aaKnown RBP10.28□□□□□ -0.76
VPS26A-204ENST00000467852 PACSIN1Q9BY11 444 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms