RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CNRIP1Q96F85 164 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-207ENST00000467819 CALHM2Q9HA72 323 aa19.19■□□□□ 0.66
COL9A3-207ENST00000467819 NMRK1Q9NWW6 199 aa19.19■□□□□ 0.66
COL9A3-207ENST00000467819 TRPS1Q9UHF7 1281 aa19.19■□□□□ 0.66
COL9A3-207ENST00000467819 ZNF225Q9UK10 706 aa19.19■□□□□ 0.66
COL9A3-207ENST00000467819 NAV3Q8IVL0 2385 aa19.19■□□□□ 0.66
COL9A3-207ENST00000467819 URI1O94763 535 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-207ENST00000467819 ACTL6AO96019 429 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 SBK3P0C264 359 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 RHOXF2BP0C7M4 288 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 TMIGD3P0DMS9 266 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-207ENST00000467819 KLK2P20151 261 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 OPRM1P35372 400 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 DGKQP52824 942 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 PPP2R2AP63151 447 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 SRYQ05066 204 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 KIF18BQ86Y91 864 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 CDYL2Q8N8U2 506 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 LINC01560Q8TB33 94 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 CTHRC1Q96CG8 243 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 ZNF681Q96N22 645 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 FMO2Q99518 471 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 TUBA1CQ9BQE3 449 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 ANKRA2Q9H9E1 313 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 PRODH2Q9UF12 536 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 FETUBQ9UGM5 382 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 DMGDHQ9UI17 866 aaKnown RBP19.18■□□□□ 0.66
COL9A3-207ENST00000467819 UTS2RQ9UKP6 389 aa19.18■□□□□ 0.66
COL9A3-207ENST00000467819 NIPBLQ6KC79 2804 aaeCLIP19.17■□□□□ 0.66
COL9A3-207ENST00000467819 VPS13CQ709C8 3753 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 H0Y3Z8 333 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 PPICP45877 212 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 SLCO1A2P46721 670 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 EMDP50402 254 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 DCAF7P61962 342 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 CLCQ05315 142 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 SNTA1Q13424 505 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 DAZAP2Q15038 168 aaPredicted RBP19.17■□□□□ 0.66
COL9A3-207ENST00000467819 PLXDC2Q6UX71 529 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 ZPLD1Q8TCW7 415 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 TMBIM1Q969X1 311 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 C1QTNF3Q9BXJ4 246 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 TSPYL1Q9H0U9 437 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 HEY2Q9UBP5 337 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 VPS29Q9UBQ0 182 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 ZNF180Q9UJW8 692 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 EDARQ9UNE0 448 aa19.17■□□□□ 0.66
COL9A3-207ENST00000467819 EXO1Q9UQ84 846 aaKnown RBP19.17■□□□□ 0.66
COL9A3-207ENST00000467819 FRG2CA6NGY1 282 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 MANBAO00462 879 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 NME6O75414 186 aaPredicted RBP19.16■□□□□ 0.66
COL9A3-207ENST00000467819 REM1O75628 298 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 CBR3O75828 277 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 EPXP11678 715 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 CHN1P15882 459 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 DRD5P21918 477 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 HSD17B3P37058 310 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 TRA2BP62995 288 aaKnown RBP19.16■□□□□ 0.66
COL9A3-207ENST00000467819 FOXF2Q12947 444 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 PAMR1Q6UXH9 720 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 CCDC116Q8IYX3 515 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 TMEM151AQ8N4L1 468 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 WDSUB1Q8N9V3 476 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 OR2B2Q9GZK3 357 aa19.16■□□□□ 0.66
COL9A3-207ENST00000467819 TO15178 435 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 ERN1O75460 977 aaKnown RBP19.15■□□□□ 0.66
COL9A3-207ENST00000467819 SUPT7LO94864 414 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 IL18BPO95998 194 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 KRT6AP02538 564 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 KRT6BP04259 564 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 IL3P08700 152 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 SNRPAP09012 282 aaKnown RBP19.15■□□□□ 0.66
COL9A3-207ENST00000467819 CPN1P15169 458 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 KRT6CP48668 564 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 SORDQ00796 357 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 ZNF628Q5EBL2 1059 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 ENPP6Q6UWR7 440 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 LUZP2Q86TE4 346 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 IFNEQ86WN2 208 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 TRIM42Q8IWZ5 723 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 NOA1Q8NC60 698 aaKnown RBP19.15■□□□□ 0.66
COL9A3-207ENST00000467819 KAT2AQ92830 837 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 EXOSC8Q96B26 276 aaKnown RBP19.15■□□□□ 0.66
COL9A3-207ENST00000467819 TMCO6Q96DC7 493 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 C16orf45Q96MC5 204 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-207ENST00000467819 COL21A1Q96P44 957 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 JKAMPQ9P055 326 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 MCM8Q9UJA3 840 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 DLGAP4Q9Y2H0 992 aa19.15■□□□□ 0.66
COL9A3-207ENST00000467819 GPR55Q9Y2T6 319 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-207ENST00000467819 A0A087WUV0 522 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-207ENST00000467819 OR6C70A6NIJ9 312 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 PCDH7O60245 1069 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 TAC1P20366 129 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 TCEA1P23193 301 aaKnown RBP19.14■□□□□ 0.65
COL9A3-207ENST00000467819 HMOX2P30519 316 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 STARP49675 285 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 CORO7P57737 925 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 HMGCS1Q01581 520 aa19.14■□□□□ 0.65
COL9A3-207ENST00000467819 FOXD4Q12950 439 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms