RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 STXBP2Q15833 593 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 HSP90AA5PQ58FG0 334 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 ACER2Q5QJU3 275 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 OTPQ5XKR4 325 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 MFSD7Q6UXD7 560 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 CYP4V2Q6ZWL3 525 aaPredicted RBP1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 ANKRD46Q86W74 232 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 C17orf64Q86WR6 236 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 TMEM126BQ8IUX1 230 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 ZNF444Q8N0Y2 327 aaPredicted RBP1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 KDM8Q8N371 416 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 CNNM3Q8NE01 707 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 OR52E1Q8NGJ3 308 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 EXOC6Q8TAG9 804 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 TCP11Q8WWU5 503 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 RAB3CQ96E17 227 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 PCED1BQ96HM7 432 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 C16orf45Q96MC5 204 aaPredicted RBP1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 ZNF560Q96MR9 790 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 SPATA13Q96N96 652 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 TBX15Q96SF7 602 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 KCNK16Q96T55 309 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 DDX50Q9BQ39 737 aaKnown RBP1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 C17orf62Q9BQA9 187 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 FAM213AQ9BRX8 229 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 C19orf24Q9BVV8 132 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 IDI2Q9BXS1 227 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 NUSAP1Q9BXS6 441 aaKnown RBP1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 DDX47Q9H0S4 455 aaKnown RBP1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 HSD3B7Q9H2F3 369 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 SH3BGRL2Q9UJC5 107 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 BLOC1S6Q9UL45 172 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 AURKCQ9UQB9 309 aa1.74□□□□□ -2.13
GTF3C3-209ENST00000466862 A0A087X0K7 114 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 RGSL1A5PLK6 1076 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 ARHGAP42A6NI28 874 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 EFCAB7A8K855 629 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 A8MX80 341 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TLR4O00206 839 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 NDC80O14777 642 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 RASGRF2O14827 1237 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 NUDT21O43809 227 aaKnown RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 ATP6V1G1O75348 118 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TRIM16O95361 564 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 CXCL14O95715 111 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 GAS8O95995 478 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 MT-ATP6P00846 226 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 IGHDP01880 384 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 AREGP15514 252 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 CALML3P27482 149 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 ARHGDIAP52565 204 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 SRP54P61011 504 aaKnown RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 SLC34A1Q06495 639 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 SLC3A1Q07837 685 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 PPP1R8Q12972 351 aaKnown RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TSTA3Q13630 321 aaPredicted RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 SLC10A1Q14973 349 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TAF7Q15545 349 aaPredicted RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 CCDC40Q4G0X9 1142 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TFDP3Q5H9I0 405 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 SEL1L2Q5TEA6 688 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 C12orf60Q5U649 245 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 GALNT17Q6IS24 598 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 NEK5Q6P3R8 708 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 ISLR2Q6UXK2 745 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 B3GLCTQ6Y288 498 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 SIGLEC15Q6ZMC9 328 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 SCARA5Q6ZMJ2 495 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 RBM43Q6ZSC3 357 aaKnown RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 C1orf186Q6ZWK4 172 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 ASPGQ86U10 573 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TGIF2LYQ8IUE0 185 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 C14orf178Q8N769 122 aaPredicted RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 Q8N9G6 341 aaPredicted RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 ZBTB44Q8NCP5 570 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 CCDC197Q8NCU1 140 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 CCNYQ8ND76 341 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 CCDC110Q8TBZ0 833 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 FAM46BQ96A09 425 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 SYAP1Q96A49 352 aaPredicted RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 C16orf58Q96GQ5 468 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 EPSTI1Q96J88 318 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 NSMCE2Q96MF7 247 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 NAP1L5Q96NT1 182 aaPredicted RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TSGA13Q96PP4 275 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 SSX3Q99909 188 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 ACPTQ9BZG2 426 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TSPYL1Q9H0U9 437 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 CARD9Q9H257 536 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 ZNF702PQ9H963 129 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 LIN28AQ9H9Z2 209 aaKnown RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 MAGEF1Q9HAY2 307 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TIGARQ9NQ88 270 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 ZCCHC3Q9NUD5 404 aaKnown RBP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TAS2R3Q9NYW6 316 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 SPASTQ9UBP0 616 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 TRIM10Q9UDY6 481 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 PRODH2Q9UF12 536 aa1.73□□□□□ -2.13
GTF3C3-209ENST00000466862 APOBEC3BQ9UH17 382 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms