RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 EMDP50402 254 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 AGFG1P52594 562 aaKnown RBP17.46■□□□□ 0.39
COL9A3-206ENST00000466532 CSTF3Q12996 717 aaKnown RBP17.46■□□□□ 0.39
COL9A3-206ENST00000466532 SNTA1Q13424 505 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 RCAN2Q14206 197 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 RASA2Q15283 850 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 UNC50Q53HI1 259 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 ZNF678Q5SXM1 525 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 LGSNQ5TDP6 509 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 MBD3L2Q8NHZ7 208 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-206ENST00000466532 FAM222BQ8WU58 562 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 NINJ1Q92982 152 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 LIME1Q9H400 295 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 SERHLQ9NQF3 203 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 CCM2LQ9NUG4 571 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-206ENST00000466532 TMEM216Q9P0N5 145 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 FETUBQ9UGM5 382 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 ST6GALNAC2Q9UJ37 374 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 MCM8Q9UJA3 840 aa17.46■□□□□ 0.39
COL9A3-206ENST00000466532 FAM221AA4D161 298 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 PRAMEF25A6NGN4 478 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 A6NNC1 897 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 CHN1P15882 459 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 TACR1P25103 407 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 CTSSP25774 331 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 ZNF628Q5EBL2 1059 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 CCDC116Q8IYX3 515 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 MNS1Q8NEH6 495 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 ZNF675Q8TD23 568 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 TMBIM1Q969X1 311 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 RMND5BQ96G75 393 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-206ENST00000466532 TMEM237Q96Q45 408 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 FOXC2Q99958 501 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 CALHM2Q9HA72 323 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 CBLCQ9ULV8 474 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 EXO1Q9UQ84 846 aaKnown RBP17.45■□□□□ 0.38
COL9A3-206ENST00000466532 DLGAP4Q9Y2H0 992 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 PCNX3Q9H6A9 2034 aa17.45■□□□□ 0.38
COL9A3-206ENST00000466532 MAP1AP78559 2803 aaPredicted RBP17.44■□□□□ 0.38
COL9A3-206ENST00000466532 FRG2CA6NGY1 282 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 EEF1E1-BLOC1S5C9J1V9 151 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 TO15178 435 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 EEF1E1O43324 174 aaKnown RBP17.44■□□□□ 0.38
COL9A3-206ENST00000466532 PCDH7O60245 1069 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 ULK1O75385 1050 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 REM1O75628 298 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 CBR3O75828 277 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 BCAS2O75934 225 aaPredicted RBP17.44■□□□□ 0.38
COL9A3-206ENST00000466532 IL3P08700 152 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 CTAGE8P0CG41 777 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 CYP4B1P13584 511 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 HMOX2P30519 316 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 OPRM1P35372 400 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 GLE1Q53GS7 698 aaKnown RBP17.44■□□□□ 0.38
COL9A3-206ENST00000466532 GPRIN3Q6ZVF9 776 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 CTAGE4Q8IX94 777 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 WDSUB1Q8N9V3 476 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 OR14L1PQ8NHC6 308 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 GOT1L1Q8NHS2 421 aaPredicted RBP17.44■□□□□ 0.38
COL9A3-206ENST00000466532 RDH11Q8TC12 318 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 METTL6Q8TCB7 284 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 ZPLD1Q8TCW7 415 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 TMCO6Q96DC7 493 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 COL21A1Q96P44 957 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 ZNF382Q96SR6 550 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 OR2B2Q9GZK3 357 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 ANKRA2Q9H9E1 313 aa17.44■□□□□ 0.38
COL9A3-206ENST00000466532 GPR55Q9Y2T6 319 aaPredicted RBP17.44■□□□□ 0.38
COL9A3-206ENST00000466532 ZFHX3Q15911 3703 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 GNG14A0A1W2PPG7 69 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 TUBAL3A6NHL2 446 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 OR6C70A6NIJ9 312 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 DLX3O60479 287 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 DRD2P14416 443 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 CPN1P15169 458 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 GCAP28676 217 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 SLCO1A2P46721 670 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 RAE1P78406 368 aaKnown RBP17.43■□□□□ 0.38
COL9A3-206ENST00000466532 TIFABQ6ZNK6 161 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 CDC20BQ86Y33 519 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 KIF18BQ86Y91 864 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 GBP7Q8N8V2 638 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-206ENST00000466532 C9orf106Q8NAJ2 232 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 OR9A2Q8NGT5 310 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 KAT2AQ92830 837 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 EXOSC8Q96B26 276 aaKnown RBP17.43■□□□□ 0.38
COL9A3-206ENST00000466532 MTBPQ96DY7 904 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 ACPTQ9BZG2 426 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 CXXC4Q9H2H0 198 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 PLEKHA6Q9Y2H5 1048 aa17.43■□□□□ 0.38
COL9A3-206ENST00000466532 ZNF469Q96JG9 3925 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-206ENST00000466532 H0Y3Z8 333 aa17.42■□□□□ 0.38
COL9A3-206ENST00000466532 ABCB7O75027 752 aa17.42■□□□□ 0.38
COL9A3-206ENST00000466532 NME6O75414 186 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-206ENST00000466532 ABHD2P08910 425 aa17.42■□□□□ 0.38
COL9A3-206ENST00000466532 TMIGD3P0DMS9 266 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-206ENST00000466532 IMPDH1P20839 514 aa17.42■□□□□ 0.38
COL9A3-206ENST00000466532 ATP5F1P24539 256 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-206ENST00000466532 DNASE1P24855 282 aa17.42■□□□□ 0.38
COL9A3-206ENST00000466532 HTR6P50406 440 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms