RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 OR4N4Q8N0Y3 316 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 ATG16L2Q8NAA4 619 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 C11orf65Q8NCR3 313 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 SRFBP1Q8NEF9 429 aaKnown RBP9.42□□□□□ -0.9
PMF1-204ENST00000466489 OR52B6Q8NGF0 335 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 OR2T11Q8NH01 316 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 NKD1Q969G9 470 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 COL26A1Q96A83 441 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 SH3YL1Q96HL8 342 aaPredicted RBP9.42□□□□□ -0.9
PMF1-204ENST00000466489 FBXL20Q96IG2 436 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 FCRL1Q96LA6 429 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 QRFPRQ96P65 431 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 CCNL2Q96S94 520 aaPredicted RBP9.42□□□□□ -0.9
PMF1-204ENST00000466489 MAPKAP1Q9BPZ7 522 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 CPPED1Q9BRF8 314 aaPredicted RBP9.42□□□□□ -0.9
PMF1-204ENST00000466489 FUNDC2Q9BWH2 189 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 GPR87Q9BY21 358 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 CRNNQ9UBG3 495 aaPredicted RBP9.42□□□□□ -0.9
PMF1-204ENST00000466489 PPT2Q9UMR5 302 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 VPS4AQ9UN37 437 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 RAXQ9Y2V3 346 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 FAM32AQ9Y421 112 aaKnown RBP9.42□□□□□ -0.9
PMF1-204ENST00000466489 PCDHGB5Q9Y5G0 923 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 AKAP13Q12802 2813 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 CACNA1BQ00975 2339 aa9.42□□□□□ -0.9
PMF1-204ENST00000466489 SCN3AQ9NY46 2000 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 A0A1W2PPW3 197 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 EFCAB10A6NFE3 127 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 CLIC1O00299 241 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 FOXE1O00358 373 aaPredicted RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 CLEC3AO75596 197 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 MED26O95402 600 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 SERPINA1P01009 418 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 NCK1P16333 377 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 TCN2P20062 427 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 EFNA1P20827 205 aaPredicted RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 FBLP22087 321 aaKnown RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 RRM2P31350 389 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 DLSTP36957 453 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 TMED10P49755 219 aaKnown RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 CLK1P49759 484 aaKnown RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 ANXA11P50995 505 aaKnown RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 PPP5CP53041 499 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 TMPRSS3P57727 454 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 CYP4F2P78329 520 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 SLC35A2P78381 396 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 ACSM2AQ08AH3 577 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 CDC20Q12834 499 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 CLN3Q13286 438 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 KCNAB2Q13303 367 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 HKDC1Q2TB90 917 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 PRTGQ2VWP7 1150 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 NKAIN1Q4KMZ8 207 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 CPTPQ5TA50 214 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 ARHGAP40Q5TG30 622 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 C1orf189Q5VU69 101 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 ACSM2BQ68CK6 577 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 KDM4DQ6B0I6 523 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 NOXRED1Q6NXP6 359 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 IKBIPQ70UQ0 350 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 CBLL1Q75N03 491 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 SPACA3Q8IXA5 215 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 BPIFB6Q8NFQ5 453 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 FBXO30Q8TB52 745 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 NT5CQ8TCD5 201 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 NR4A3Q92570 626 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 FKBP10Q96AY3 582 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 TEX37Q96LM6 180 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 DACH2Q96NX9 599 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 PSD2Q9BQI7 771 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 BHLHE41Q9C0J9 482 aaPredicted RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 ROGDIQ9GZN7 287 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 CCDC90BQ9GZT6 254 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 LHPPQ9H008 270 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 ACTL8Q9H568 366 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 RUBCNLQ9H714 662 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 ZNF304Q9HCX3 659 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 KRT84Q9NSB2 600 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 STARD5Q9NSY2 213 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 DHCR7Q9UBM7 475 aaKnown RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 ZNF225Q9UK10 706 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 NXT1Q9UKK6 140 aaKnown RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 NDRG4Q9ULP0 352 aaKnown RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 POFUT2Q9Y2G5 429 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 TSC22D4Q9Y3Q8 395 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 ASB1Q9Y576 335 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 PEX16Q9Y5Y5 336 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 SLC22A7Q9Y694 548 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 ANKRD11Q6UB99 2663 aaPredicted RBP9.41□□□□□ -0.9
PMF1-204ENST00000466489 FER1L5A0AVI2 2057 aa9.41□□□□□ -0.9
PMF1-204ENST00000466489 MAP1BP46821 2468 aaKnown RBP9.4□□□□□ -0.9
PMF1-204ENST00000466489 A0A1B0GVG6 124 aa9.4□□□□□ -0.9
PMF1-204ENST00000466489 FUOMA2VDF0 154 aa9.4□□□□□ -0.9
PMF1-204ENST00000466489 TMEM247A6NEH6 219 aa9.4□□□□□ -0.9
PMF1-204ENST00000466489 ZNF891A8MT65 544 aaPredicted RBP9.4□□□□□ -0.9
PMF1-204ENST00000466489 LOC110117498-PIK3R3F6TDL0 507 aa9.4□□□□□ -0.9
PMF1-204ENST00000466489 H0YIG0 161 aa9.4□□□□□ -0.9
PMF1-204ENST00000466489 H3BMH7 237 aa9.4□□□□□ -0.9
PMF1-204ENST00000466489 RNASET2O00584 256 aaKnown RBP9.4□□□□□ -0.9
PMF1-204ENST00000466489 HCRTR1O43613 425 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms