RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 FABP3P05413 133 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 MSL3P1P0C860 447 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 CCL4P13236 92 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 PPIBP23284 216 aaKnown RBP17.45■□□□□ 0.38
CAPN3-209ENST00000466222 BUD31P41223 144 aaPredicted RBP17.45■□□□□ 0.38
CAPN3-209ENST00000466222 GSTM5P46439 218 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 GCGRP47871 477 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 BMXP51813 675 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 MANFP55145 182 aaKnown RBP17.45■□□□□ 0.38
CAPN3-209ENST00000466222 VEZF1Q14119 521 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 STPG1Q5TH74 334 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 EIF3MQ7L2H7 374 aaKnown RBP17.45■□□□□ 0.38
CAPN3-209ENST00000466222 ZZZ3Q8IYH5 903 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 SUN3Q8TAQ9 357 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 DOK4Q8TEW6 326 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 APOL4Q9BPW4 351 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 GLIPR2Q9H4G4 154 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 CXorf36Q9H7Y0 433 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 LYRM4Q9HD34 91 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 CCNB1IP1Q9NPC3 277 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 SCN3BQ9NY72 215 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 TAS2R7Q9NYW3 318 aa17.45■□□□□ 0.38
CAPN3-209ENST00000466222 TBX19O60806 448 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 ANGPTL1O95841 491 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 NTRK1P04629 796 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 AGXTP21549 392 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 IL5RAQ01344 420 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 MVKQ03426 396 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 LRRC74AQ0VAA2 488 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 GARNL3Q5VVW2 1013 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 KDM4DQ6B0I6 523 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 PWWP2BQ6NUJ5 590 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 C16orf87Q6PH81 154 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 CBLL1Q75N03 491 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 GPR155Q7Z3F1 870 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 PIWIL3Q7Z3Z3 882 aaKnown RBP17.44■□□□□ 0.38
CAPN3-209ENST00000466222 PMEPA1Q969W9 287 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 EHD3Q9NZN3 535 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 PHF11Q9UIL8 331 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 SNX8Q9Y5X2 465 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 ASPMQ8IZT6 3477 aa17.44■□□□□ 0.38
CAPN3-209ENST00000466222 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.43■□□□□ 0.38
CAPN3-209ENST00000466222 EFCAB7A8K855 629 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 FGF17O60258 216 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 ZNF682O95780 498 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 PRKACGP22612 351 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 KDELR2P33947 212 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 FRKP42685 505 aaPredicted RBP17.43■□□□□ 0.38
CAPN3-209ENST00000466222 FOXL2P58012 376 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 SVOPQ8N4V2 548 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 ZNF681Q96N22 645 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 AMDHD1Q96NU7 426 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 DPYSL5Q9BPU6 564 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 NDC1Q9BTX1 674 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 ANKRA2Q9H9E1 313 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 TAS2R9Q9NYW1 312 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 PMS2P1A4D2B8 440 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 B4GALT2O60909 372 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 BCAS1O75363 584 aaPredicted RBP17.43■□□□□ 0.38
CAPN3-209ENST00000466222 GABARAPO95166 117 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 KCNK5O95279 499 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 CSTF2P33240 577 aaKnown RBP eCLIP17.43■□□□□ 0.38
CAPN3-209ENST00000466222 NCBP2P52298 156 aaKnown RBP eCLIP17.43■□□□□ 0.38
CAPN3-209ENST00000466222 INSM1Q01101 510 aaPredicted RBP17.43■□□□□ 0.38
CAPN3-209ENST00000466222 ACY1Q03154 408 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 RAPSNQ13702 412 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 LTB4RQ15722 352 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 FAM214AQ32MH5 1076 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 SLC16A12Q6ZSM3 486 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 ASCL5Q7RTU5 278 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 EGFL6Q8IUX8 553 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 TMEM151BQ8IW70 566 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 PARP8Q8N3A8 854 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 RNF217Q8TC41 542 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 BBS4Q96RK4 519 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 DUSP21Q9H596 190 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 VNN3Q9NY84 501 aa17.43■□□□□ 0.38
CAPN3-209ENST00000466222 ASCC3Q8N3C0 2202 aaKnown RBP17.42■□□□□ 0.38
CAPN3-209ENST00000466222 SLC22A1O15245 554 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 LRP3O75074 770 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 NME6O75414 186 aaPredicted RBP17.42■□□□□ 0.38
CAPN3-209ENST00000466222 TLX1P31314 330 aaPredicted RBP17.42■□□□□ 0.38
CAPN3-209ENST00000466222 GP2P55259 537 aaKnown RBP17.42■□□□□ 0.38
CAPN3-209ENST00000466222 RAB38P57729 211 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 OCA2Q04671 838 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 ANKRD34AQ69YU3 496 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 CYP4Z1Q86W10 505 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 OR51Q1Q8NH59 317 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 CHPT1Q8WUD6 406 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 FAR1Q8WVX9 515 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 SGCDQ92629 289 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 RORBQ92753 470 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 COL26A1Q96A83 441 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 ZNF347Q96SE7 839 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 YIPF2Q9BWQ6 316 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 ENAMQ9NRM1 1142 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 SIRT3Q9NTG7 399 aaPredicted RBP17.42■□□□□ 0.38
CAPN3-209ENST00000466222 GPATCH2Q9NW75 528 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 MS4A12Q9NXJ0 267 aa17.42■□□□□ 0.38
CAPN3-209ENST00000466222 U3KQV3 271 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms