RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CPEP16870 476 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 C5AR1P21730 350 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 TEAD1P28347 426 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 MC3RP41968 323 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 PSPHP78330 225 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 DUSP2Q05923 314 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 TGM3Q08188 693 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 RAB40BQ12829 278 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 FGL2Q14314 439 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 LRRC32Q14392 662 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 C3orf38Q5JPI3 329 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 TANGO2Q6ICL3 276 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 ZNF730Q6ZMV8 503 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 MEX3DQ86XN8 651 aaKnown RBP17.22■□□□□ 0.35
SYNE4-204ENST00000465425 CELF2-AS1Q8N7Q2 184 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 NUP43Q8NFH3 380 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 SETD6Q8TBK2 473 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 GNPDA2Q8TDQ7 276 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 GANCQ8TET4 914 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 ASB15Q8WXK1 588 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 NR4A3Q92570 626 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 OR7D2Q96RA2 312 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 CARD8Q9Y2G2 431 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 GPR52Q9Y2T5 361 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 CMAHPQ9Y471 501 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 ZNF780BQ9Y6R6 833 aa17.22■□□□□ 0.35
SYNE4-204ENST00000465425 IQCMA0A1B0GVH7 501 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 APOL3O95236 402 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 IL1AP01583 271 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 ACP2P11117 423 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 MYOGP15173 224 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 CASP3P42574 277 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 COPZ1P61923 177 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 LRIT3Q3SXY7 679 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 ARMC4Q5T2S8 1044 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 C22orf42Q6IC83 251 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 NUDT18Q6ZVK8 323 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 C16orf62Q7Z3J2 963 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 KIF18BQ86Y91 864 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 SLC25A46Q96AG3 418 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 RNFT2Q96EX2 444 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 BTBD1Q9H0C5 482 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 SAP130Q9H0E3 1048 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 FBXL12Q9NXK8 326 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 OBP2AQ9NY56 170 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 CALML5Q9NZT1 146 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 A0A1W2PS29 197 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 HTR3EA5X5Y0 456 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 CPSF4LA6NMK7 179 aaKnown RBP17.21■□□□□ 0.35
SYNE4-204ENST00000465425 H3BQ06 376 aaPredicted RBP17.21■□□□□ 0.35
SYNE4-204ENST00000465425 SYT5O00445 386 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 PLD2O14939 933 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 FRS3O43559 492 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 CHRM5P08912 532 aaPredicted RBP17.21■□□□□ 0.35
SYNE4-204ENST00000465425 F3P13726 295 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 CMPK1P30085 196 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 TGM4P49221 684 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 EFNB1P98172 346 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 ST3GAL3Q11203 375 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 LARS2Q15031 903 aaKnown RBP17.21■□□□□ 0.35
SYNE4-204ENST00000465425 TRAM2Q15035 370 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 SPATC1Q76KD6 591 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 ZNF513Q8N8E2 541 aaPredicted RBP17.21■□□□□ 0.35
SYNE4-204ENST00000465425 OR9A2Q8NGT5 310 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 WDFY2Q96P53 400 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 PRR14Q9BWN1 585 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 RMI1Q9H9A7 625 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 KLHL28Q9NXS3 571 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 GDE1Q9NZC3 331 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 CNIH4Q9P003 139 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 TBC1D24Q9ULP9 559 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 V9GYH0 126 aa17.21■□□□□ 0.35
SYNE4-204ENST00000465425 SSX4O60224 188 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 EIF2S1P05198 315 aaKnown RBP17.2■□□□□ 0.34
SYNE4-204ENST00000465425 CEACAM5P06731 702 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 CCNYL3P0C7X3 344 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 AZGP1P25311 298 aaKnown RBP17.2■□□□□ 0.34
SYNE4-204ENST00000465425 TSFMP43897 325 aaKnown RBP17.2■□□□□ 0.34
SYNE4-204ENST00000465425 MTNR1AP48039 350 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 ARFIP1P53367 373 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 STXBP1P61764 594 aaKnown RBP17.2■□□□□ 0.34
SYNE4-204ENST00000465425 RPS21P63220 83 aaKnown RBP17.2■□□□□ 0.34
SYNE4-204ENST00000465425 BNC1Q01954 994 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 MLLT1Q03111 559 aaPredicted RBP17.2■□□□□ 0.34
SYNE4-204ENST00000465425 CHRNEQ04844 493 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 TSPAN31Q12999 210 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 VRK2Q86Y07 508 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 GALNT6Q8NCL4 622 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 C1GALT1C1Q96EU7 318 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 OR2A14Q96R47 310 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 SLC38A1Q9H2H9 487 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 ANKRA2Q9H9E1 313 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 POU2F3Q9UKI9 436 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 CES1P1Q9UKY3 287 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 LIPT1Q9Y234 373 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 PCDHGA4Q9Y5G9 962 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 CHD9Q3L8U1 2897 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 SCAMP1O15126 338 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 UBXN7O94888 489 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 APODP05090 189 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms