RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 NUP43Q8NFH3 380 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 OR5M3Q8NGP4 307 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 PSMA8Q8TAA3 256 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 TEX37Q96LM6 180 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 EBF4Q9BQW3 602 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 CCDC28BQ9BUN5 200 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 CLMPQ9H6B4 373 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 SH2D2AQ9NP31 389 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 TCF7L2Q9NQB0 619 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 SACM1LQ9NTJ5 587 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 OLAHQ9NV23 265 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 NTMQ9P121 344 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 SNX8Q9Y5X2 465 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 EML6Q6ZMW3 1958 aa13.37□□□□□ -0.27
SQSTM1-205ENST00000464493 PRSS51A0A1B0GVH4 220 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 ASPDHA6ND91 283 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 E9PBE3 544 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 RNASET2O00584 256 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 TP53I11O14683 189 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 CFLARO15519 480 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 PPM1BO75688 479 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 C6orf47O95873 294 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 CCL3P10147 92 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 CNR1P21554 472 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 S100A3P33764 101 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 MEOX1P50221 254 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 WNT3P56703 355 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 FBXW4P57775 412 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 GPR85P60893 370 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 PSPHP78330 225 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 PRR5P85299 388 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 GUCY1A3Q02108 690 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 ZNHIT3Q15649 155 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 DPY19L1Q2PZI1 675 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 PDCD4Q53EL6 469 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 SPANXN4Q5MJ08 99 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 ANXA8L1Q5VT79 327 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 ZNF324BQ6AW86 544 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 NPSR1Q6W5P4 371 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 SZRD1Q7Z422 152 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 ATCAYQ86WG3 371 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 CPSF7Q8N684 471 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 POGLUT1Q8NBL1 392 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 VPS37AQ8NEZ2 397 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 OR10G3Q8NGC4 313 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 PAQR8Q8TEZ7 354 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 OMA1Q96E52 524 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 FAM120BQ96EK7 910 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 MARK4Q96L34 752 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 FRMD6Q96NE9 622 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 ZBTB18Q99592 522 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 SIRT3Q9NTG7 399 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 CNIH4Q9P003 139 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 VPS4AQ9UN37 437 aa13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 CHCHD2Q9Y6H1 151 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-205ENST00000464493 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 TTC36A6NLP5 189 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 PYCARD-AS1I3L0S3 204 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 SLC22A3O75751 556 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 ABCB1P08183 1280 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 IL12AP29459 219 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 CCT3P49368 545 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 HBA1P69905 142 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 RPP38P78345 283 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 PHC1P78364 1004 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 PSG6Q00889 435 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 PLCXD2Q0VAA5 305 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 FAM174BQ3ZCQ3 159 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 NUP54Q7Z3B4 507 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 WDR53Q7Z5U6 358 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 CDRT4Q8N9R6 151 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 GLB1L3Q8NCI6 653 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 GALNT11Q8NCW6 608 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 OR2M7Q8NG81 312 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 NR4A3Q92570 626 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 TMBIM1Q969X1 311 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 GIMAP5Q96F15 307 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 THOC1Q96FV9 657 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 MS4A4EQ96PG1 132 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 SECISBP2Q96T21 854 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 LMF2Q9BU23 707 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 CXorf36Q9H7Y0 433 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 NEUROD4Q9HD90 331 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 EQTNQ9NQ60 294 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 SDR39U1Q9NRG7 319 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 DEPPQ9NTK1 212 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 ZCCHC3Q9NUD5 404 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 ZIM2Q9NZV7 527 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 PCDHGB4Q9UN71 923 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 OR10H1Q9Y4A9 318 aa13.35□□□□□ -0.27
SQSTM1-205ENST00000464493 HELZ2Q9BYK8 2649 aaKnown RBP13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 FASNP49327 2511 aaKnown RBP13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 SVILO95425 2214 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 G3V3Y1 287 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 SCN2BO60939 215 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 REM1O75628 298 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 EDN3P14138 238 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 MST1P26927 711 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms