RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 UMPSP11172 480 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 ETS1P14921 441 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 PRDX2P32119 198 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 MAGEA4P43358 317 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 MYBPC1Q00872 1141 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 PEX6Q13608 980 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 Q1RN00 199 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 ATAD3CQ5T2N8 411 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 PNCKQ6P2M8 343 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 ZNF600Q6ZNG1 722 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 Q6ZR54 194 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 MIER3Q7Z3K6 550 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 GPBP1Q86WP2 473 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 MARCH9Q86YJ5 346 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 SPAG16Q8N0X2 631 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 RFESDQ8TAC1 157 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 CCDC47Q96A33 483 aaKnown RBP3.08□□□□□ -1.92
PTPN12-210ENST00000464313 TMEM186Q96B77 213 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 CCDC51Q96ER9 411 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 NACA2Q9H009 215 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 TIGARQ9NQ88 270 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 CIDEBQ9UHD4 219 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 PURGQ9UJV8 347 aaKnown RBP3.08□□□□□ -1.92
PTPN12-210ENST00000464313 CCPG1Q9ULG6 757 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 NAALAD2Q9Y3Q0 740 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 FKBP7Q9Y680 259 aa3.08□□□□□ -1.92
PTPN12-210ENST00000464313 BUB1O43683 1085 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 TSC22D2O75157 780 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 MT-ATP6P00846 226 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 PVRP15151 417 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 SLC6A8P48029 635 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 NOP14P78316 857 aaKnown RBP3.07□□□□□ -1.92
PTPN12-210ENST00000464313 LDLRAP1Q5SW96 308 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 TATDN1Q6P1N9 297 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 FAM159AQ6UWV7 190 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 VITQ6UXI7 678 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 STOX1Q6ZVD7 989 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 TSEN54Q7Z6J9 526 aaKnown RBP3.07□□□□□ -1.92
PTPN12-210ENST00000464313 ELMOD2Q8IZ81 293 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 ZNF619Q8N2I2 560 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 CENPSQ8N2Z9 138 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 ARFGAP2Q8N6H7 521 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 KLHL30-AS1Q8NEE0 82 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 GTSF1Q8WW33 167 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 DLX4Q92988 240 aaPredicted RBP3.07□□□□□ -1.92
PTPN12-210ENST00000464313 NDUFAF3Q9BU61 184 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 TRIM9Q9C026 710 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 TMEM231Q9H6L2 316 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 NINJ2Q9NZG7 142 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 CNOT2Q9NZN8 540 aaKnown RBP3.07□□□□□ -1.92
PTPN12-210ENST00000464313 RAI14Q9P0K7 980 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 POGZQ7Z3K3 1410 aa3.07□□□□□ -1.92
PTPN12-210ENST00000464313 NPIPA5A0A0B4J1W7 369 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 LRIT2A6NDA9 550 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 NPIPA5E9PKD4 350 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 SEC22BO75396 215 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 IGSF6O95976 241 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 ALPIP09923 528 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 SLC35E2P0CK97 266 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 LAMP1P11279 417 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 SLC26A5P58743 744 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 PAX2Q02962 417 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 FUT7Q11130 342 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 BNIP1Q12981 228 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 SMC1AQ14683 1233 aaKnown RBP3.06□□□□□ -1.92
PTPN12-210ENST00000464313 KARSQ15046 597 aaKnown RBP3.06□□□□□ -1.92
PTPN12-210ENST00000464313 ZSWIM7Q19AV6 140 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 LRIT3Q3SXY7 679 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 ACSF3Q4G176 576 aaPredicted RBP3.06□□□□□ -1.92
PTPN12-210ENST00000464313 IL23RQ5VWK5 629 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 PRR5LQ6MZQ0 368 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 NEK5Q6P3R8 708 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 ISLR2Q6UXK2 745 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 GOLGA7Q7Z5G4 137 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 RANBP3LQ86VV4 465 aaPredicted RBP3.06□□□□□ -1.92
PTPN12-210ENST00000464313 UNC5CLQ8IV45 518 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 FBXL16Q8N461 479 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 WDR36Q8NI36 951 aaKnown RBP3.06□□□□□ -1.92
PTPN12-210ENST00000464313 ZPLD1Q8TCW7 415 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 PPP1R16AQ96I34 528 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 FAM114A2Q9NRY5 505 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 SOHLH2Q9NX45 425 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.06□□□□□ -1.92
PTPN12-210ENST00000464313 FZR1Q9UM11 496 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 RNF115Q9Y4L5 304 aa3.06□□□□□ -1.92
PTPN12-210ENST00000464313 GPRASP1Q5JY77 1395 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 IGLV3-10A0A075B6K4 115 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 IGKV6D-41A0A0C4DH26 115 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 KRT87PA6NCN2 255 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 EFCAB7A8K855 629 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 IMPA2O14732 288 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 TYROBPO43914 113 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 PRAMEF12O95522 483 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 PTBP3O95758 552 aaKnown RBP3.05□□□□□ -1.92
PTPN12-210ENST00000464313 SNRPCP09234 159 aaKnown RBP3.05□□□□□ -1.92
PTPN12-210ENST00000464313 GIG44P09565 113 aaPredicted RBP3.05□□□□□ -1.92
PTPN12-210ENST00000464313 HOXB7P09629 217 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 RALAP11233 206 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 GAP43P17677 238 aa3.05□□□□□ -1.92
PTPN12-210ENST00000464313 FASP25445 335 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms