RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 EXOSC6Q5RKV6 272 aaKnown RBP16.27■□□□□ 0.2
VPS52-214ENST00000463486 PRR22Q8IZ63 422 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 POGLUT1Q8NBL1 392 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 PSMA8Q8TAA3 256 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 HGDQ93099 445 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 GIMAP5Q96F15 307 aa16.27■□□□□ 0.2
VPS52-214ENST00000463486 UTP20O75691 2785 aaKnown RBP16.27■□□□□ 0.2
VPS52-214ENST00000463486 EXPH5Q8NEV8 1989 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 ANKRD33BA6NCL7 494 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 SLCO1B7G3V0H7 640 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 SCN2BO60939 215 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 PPM1BO75688 479 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 PIGAP37287 484 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 RPL3P39023 403 aaKnown RBP16.26■□□□□ 0.19
VPS52-214ENST00000463486 WNT3P56703 355 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 PHC1P78364 1004 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 HSPB3Q12988 150 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 CPTPQ5TA50 214 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 SLC22A10Q63ZE4 541 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 FBXW8Q8N3Y1 598 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 OR4N2Q8NGD1 307 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 CKAP2Q8WWK9 683 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 ZBED6CLQ96FA7 236 aaPredicted RBP16.26■□□□□ 0.19
VPS52-214ENST00000463486 TEX37Q96LM6 180 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 CLMPQ9H6B4 373 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 SACM1LQ9NTJ5 587 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 TAS2R9Q9NYW1 312 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 GPR45Q9Y5Y3 372 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 PTPN13Q12923 2485 aa16.26■□□□□ 0.19
VPS52-214ENST00000463486 ASH1LQ9NR48 2969 aaKnown RBP16.26■□□□□ 0.19
VPS52-214ENST00000463486 SPTAN1Q13813 2472 aaKnown RBP16.25■□□□□ 0.19
VPS52-214ENST00000463486 DOPEY1Q5JWR5 2465 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 UQCRHLA0A096LP55 91 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 GOLGA8QA0A0J9YX86 632 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 GOLGA8OA6NCC3 632 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 TRPC5OSA6NMA1 111 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 GOLGA8NF8WBI6 632 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 ERN1O75460 977 aaKnown RBP16.25■□□□□ 0.19
VPS52-214ENST00000463486 DNASE1L1P49184 302 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 MANFP55145 182 aaKnown RBP16.25■□□□□ 0.19
VPS52-214ENST00000463486 RPS6KA2Q15349 733 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 HYAL4Q2M3T9 481 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 CMPK2Q5EBM0 449 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 BICRALQ6AI39 1079 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 EPGNQ6UW88 154 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 RGS9BPQ6ZS82 235 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 FAM98AQ8NCA5 519 aaKnown RBP16.25■□□□□ 0.19
VPS52-214ENST00000463486 OR5M3Q8NGP4 307 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 SPPL2AQ8TCT8 520 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 LRRC8CQ8TDW0 803 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 ACTRT2Q8TDY3 377 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 OMA1Q96E52 524 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 GPR137Q96N19 417 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 OR52B2Q96RD2 323 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 SECISBP2Q96T21 854 aaKnown RBP16.25■□□□□ 0.19
VPS52-214ENST00000463486 FAM173AQ9BQD7 235 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 BHLHE41Q9C0J9 482 aaPredicted RBP16.25■□□□□ 0.19
VPS52-214ENST00000463486 TSPAN10Q9H1Z9 355 aaPredicted RBP16.25■□□□□ 0.19
VPS52-214ENST00000463486 INTS9Q9NV88 658 aaKnown RBP16.25■□□□□ 0.19
VPS52-214ENST00000463486 AIG1Q9NVV5 245 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 TUBA8Q9NY65 449 aaPredicted RBP16.25■□□□□ 0.19
VPS52-214ENST00000463486 CNIH4Q9P003 139 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 HECTD1Q9ULT8 2610 aa16.25■□□□□ 0.19
VPS52-214ENST00000463486 NUP214P35658 2090 aaPredicted RBP16.24■□□□□ 0.19
VPS52-214ENST00000463486 A0A1W2PRB8 838 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 LRRC3CA6NJW4 275 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 TSPAN2O60636 221 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 COQ9O75208 318 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 UGT2B11O75310 529 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 ZNF24P17028 368 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 NRG3P56975 720 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 KCNK10P57789 538 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 ALDH6A1Q02252 535 aaKnown RBP16.24■□□□□ 0.19
VPS52-214ENST00000463486 PRAMEF20Q5VT98 475 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 FNDC7Q5VTL7 733 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 NUP54Q7Z3B4 507 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 FGD2Q7Z6J4 655 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 SLC34A3Q8N130 599 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 FAM13CQ8NE31 585 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 OR8J2Q8NGG1 315 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 RNF138Q8WVD3 245 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 OR5P2Q8WZ92 322 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 TMBIM1Q969X1 311 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 SLC35A4Q96G79 324 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 MAGED4Q96JG8 741 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 LMF2Q9BU23 707 aaKnown RBP16.24■□□□□ 0.19
VPS52-214ENST00000463486 ANGPTL4Q9BY76 406 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 TTTY12Q9BZ98 90 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 PLSCR2Q9NRY7 297 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 DDX18Q9NVP1 670 aaKnown RBP16.24■□□□□ 0.19
VPS52-214ENST00000463486 USH1CQ9Y6N9 552 aa16.24■□□□□ 0.19
VPS52-214ENST00000463486 CAPN14A8MX76 684 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 NPIPA5E9PKD4 350 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 ADAM10O14672 748 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 ASNA1O43681 348 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 HS6ST1O60243 411 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 TRIM3O75382 744 aaPredicted RBP16.23■□□□□ 0.19
VPS52-214ENST00000463486 UNC5CO95185 931 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 P04436 131 aa16.23■□□□□ 0.19
VPS52-214ENST00000463486 IL12AP29459 219 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms