RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 FREM2Q5SZK8 3169 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 TTC36A6NLP5 189 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 EFSO43281 561 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 PRKNO60260 465 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-202ENST00000463060 HPP00738 406 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 TFPTP0C1Z6 253 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 CT45A8P0DMV1 189 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 CT45A9P0DMV2 189 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 HTR1EP28566 365 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 OTX2P32243 289 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 CRATP43155 626 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 PPICP45877 212 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 PRIM2P49643 509 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 KCNJ2P63252 427 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 EBPQ15125 230 aaKnown RBP13.31□□□□□ -0.28
COL6A1-202ENST00000463060 DUSP5Q16690 384 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 CRTC2Q53ET0 693 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-202ENST00000463060 CT45A2Q5DJT8 189 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 HEPHL1Q6MZM0 1159 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 TNFAIP8L2Q6P589 184 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-202ENST00000463060 RNF111Q6ZNA4 994 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 WDR53Q7Z5U6 358 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-202ENST00000463060 ZZZ3Q8IYH5 903 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 FBXW8Q8N3Y1 598 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 RNF148Q8N7C7 305 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 VMP1Q96GC9 406 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 IP6K3Q96PC2 410 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 BTBD9Q96Q07 612 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 OR7D2Q96RA2 312 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 STACQ99469 402 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 YIPF4Q9BSR8 244 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 SPATA9Q9BWV2 254 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 PIGUQ9H490 435 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 ALG2Q9H553 416 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 EQTNQ9NQ60 294 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 PRODH2Q9UF12 536 aa13.31□□□□□ -0.28
COL6A1-202ENST00000463060 FAF1Q9UNN5 650 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-202ENST00000463060 DUXAA6NLW8 204 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 FAM220BPB1ANY3 271 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 GCM2O75603 506 aaPredicted RBP13.3□□□□□ -0.28
COL6A1-202ENST00000463060 SOX30O94993 753 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 OR12D1P0DN82 309 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 ARAFP10398 606 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 DRD5P21918 477 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 DSTNP60981 165 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 RNF4P78317 190 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 RBBP4Q09028 425 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 Q0VFX4 171 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 ATP1A4Q13733 1029 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 EXT1Q16394 746 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 NPSR1Q6W5P4 371 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 SZRD1Q7Z422 152 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 PTRH1Q86Y79 214 aaKnown RBP13.3□□□□□ -0.28
COL6A1-202ENST00000463060 RAB43Q86YS6 212 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 HPS6Q86YV9 775 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 ARMC10Q8N2F6 343 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 ZNF248Q8NDW4 579 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 CHDHQ8NE62 594 aaPredicted RBP13.3□□□□□ -0.28
COL6A1-202ENST00000463060 C17orf47Q8NEP4 570 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 OR5D16Q8NGK9 328 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 FAM110BQ8TC76 370 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 ADAMTS15Q8TE58 950 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 RAB8BQ92930 207 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 REXO5Q96IC2 774 aaKnown RBP13.3□□□□□ -0.28
COL6A1-202ENST00000463060 ITPAQ9BY32 194 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 DPH1Q9BZG8 443 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 PIF1Q9H611 641 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 MMP25Q9NPA2 562 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 A4GALTQ9NPC4 353 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 THUMPD1Q9NXG2 353 aaKnown RBP13.3□□□□□ -0.28
COL6A1-202ENST00000463060 COPS7AQ9UBW8 275 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 FBXL4Q9UKA2 621 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 CFL2Q9Y281 166 aa13.3□□□□□ -0.28
COL6A1-202ENST00000463060 CEP295Q9C0D2 2601 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 NSG1A0A0A6YYJ2 146 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 ELOVL7A1L3X0 281 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 ANKRD65E5RJM6 399 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 ACOT8O14734 319 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 TO15178 435 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 PDE5AO76074 875 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 CELA2AP08217 269 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 ME2P23368 584 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 MSX2P35548 267 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-202ENST00000463060 KHKP50053 298 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 ANXA11P50995 505 aaKnown RBP13.29□□□□□ -0.28
COL6A1-202ENST00000463060 CLCN2P51788 898 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 CORO7P57737 925 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 DCAF7P61962 342 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 MS4A2Q01362 244 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 FUT5Q11128 374 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 VEZF1Q14119 521 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 TRIM25Q14258 630 aaKnown RBP13.29□□□□□ -0.28
COL6A1-202ENST00000463060 VMACQ2NL98 169 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 H3F3CQ6NXT2 135 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 ANGPTL8Q6UXH0 198 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 HSDL2Q6YN16 418 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 ZNF771Q7L3S4 317 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-202ENST00000463060 MICU2Q8IYU8 434 aa13.29□□□□□ -0.28
COL6A1-202ENST00000463060 FAM156AQ8NDB6 213 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms