RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 SYT1P21579 422 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PSMA2P25787 234 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 IL1R2P27930 398 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PSMB5P28074 263 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 MIPP30301 263 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 FOXN2P32314 431 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 GCKP35557 465 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 TNNT3P45378 269 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 RPL21P46778 160 aaKnown RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 PDLIM4P50479 330 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 CDK9P50750 372 aaKnown RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 GPR143P51810 404 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PNLIPRP1P54315 467 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 EIF3BP55884 814 aaKnown RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 NANOS2P60321 138 aaKnown RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 IRX6P78412 446 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 CDR2Q01850 454 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 OGDHQ02218 1023 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 KIF5AQ12840 1032 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 KLF1Q13351 362 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 STIM1Q13586 685 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 GRB7Q14451 532 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 FGFBP1Q14512 234 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 BRD3Q15059 726 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 FAM189A2Q15884 450 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PHKG1Q16816 387 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 GPR33Q49SQ1 333 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 SYTL3Q4VX76 610 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 BOLA3Q53S33 107 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 ZNF628Q5EBL2 1059 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 DCST1Q5T197 706 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 ZNF529Q6P280 563 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 TTC23LQ6PF05 361 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 HSDL2Q6YN16 418 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 QSOX2Q6ZRP7 698 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 CLEC17AQ6ZS10 378 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 CYP4V2Q6ZWL3 525 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 UBE2R2Q712K3 238 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 PRSS41Q7RTY9 318 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 IRF2BP2Q7Z5L9 587 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 SNX20Q7Z614 316 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PHF13Q86YI8 300 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 CLDN19Q8N6F1 224 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 CNEP1R1Q8N9A8 125 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 CCNYQ8ND76 341 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 GABPB2Q8TAK5 448 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 BLOC1S5Q8TDH9 187 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PAQR8Q8TEZ7 354 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 ELMO1Q92556 727 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 NEUROG1Q92886 237 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 NCLNQ969V3 563 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 RAD51AP1Q96B01 352 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 DHTKD1Q96HY7 919 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 ZNF845Q96IR2 970 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 FOXN4Q96NZ1 517 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 RBM4BQ9BQ04 359 aaKnown RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 DOHHQ9BU89 302 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 TRIM2Q9C040 744 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 SLC25A51Q9H1U9 297 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 OR10A4Q9H209 315 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 LIN28AQ9H9Z2 209 aaKnown RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 NTN4Q9HB63 628 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 MRPS30Q9NP92 439 aaKnown RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 SIX2Q9NPC8 291 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 NGBQ9NPG2 151 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 FANCFQ9NPI8 374 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 ESM1Q9NQ30 184 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 CBLN4Q9NTU7 201 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 ACSS1Q9NUB1 689 aaPredicted RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 MOCS1Q9NZB8 636 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 CNIH4Q9P003 139 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 MYO1AQ9UBC5 1043 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 CLCF1Q9UBD9 225 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 FETUBQ9UGM5 382 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 CIDEBQ9UHD4 219 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PCYOX1Q9UHG3 505 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 PTBP2Q9UKA9 531 aaKnown RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 SH2B3Q9UQQ2 575 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 RUVBL2Q9Y230 463 aaKnown RBP2.52□□□□□ -2.01
CD46-210ENST00000462968 SLC6A5Q9Y345 797 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 SPEF1Q9Y4P9 236 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 SNX8Q9Y5X2 465 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 IKBKGQ9Y6K9 419 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.52□□□□□ -2.01
CD46-210ENST00000462968 MPDZO75970 2070 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 ANKRD12Q6UB98 2062 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 NOTCH3Q9UM47 2321 aa2.52□□□□□ -2.01
CD46-210ENST00000462968 DYNC2H1Q8NCM8 4307 aaKnown RBP2.51□□□□□ -2.01
CD46-210ENST00000462968 CCDC88CQ9P219 2028 aa2.51□□□□□ -2.01
CD46-210ENST00000462968 RAI1Q7Z5J4 1906 aaPredicted RBP2.51□□□□□ -2.01
CD46-210ENST00000462968 KCNE1BA0A087WTH5 132 aa2.51□□□□□ -2.01
CD46-210ENST00000462968 IGKV1-8A0A0C4DH67 115 aa2.51□□□□□ -2.01
CD46-210ENST00000462968 A0A1B0GUS0 222 aa2.51□□□□□ -2.01
CD46-210ENST00000462968 A0A1B0GVL5 298 aa2.51□□□□□ -2.01
CD46-210ENST00000462968 A0A1W2PPV9 198 aa2.51□□□□□ -2.01
CD46-210ENST00000462968 BICDL2A1A5D9 508 aa2.51□□□□□ -2.01
CD46-210ENST00000462968 PABPN1LA6NDY0 278 aaKnown RBP2.51□□□□□ -2.01
CD46-210ENST00000462968 FAM90A10PA6NDY2 464 aa2.51□□□□□ -2.01
CD46-210ENST00000462968 B4DSR2 109 aa2.51□□□□□ -2.01
CD46-210ENST00000462968 G3V4G9 280 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms