RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ZYG11AQ6WRX3 759 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 TRIM46Q7Z4K8 759 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 TDRPQ86YL5 185 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 CCDC116Q8IYX3 515 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 CLYBLQ8N0X4 340 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 LIX1Q8N485 282 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 SIMC1Q8NDZ2 872 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 ADCY4Q8NFM4 1077 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 OR52R1Q8NGF1 315 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 OR10Q1Q8NGQ4 319 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 FAM76AQ8TAV0 307 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.37□□□□□ -1.07
BRCA1-207ENST00000461798 C16orf78Q8WTQ4 265 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 APIPQ96GX9 242 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 METTL2AQ96IZ6 378 aaKnown RBP8.37□□□□□ -1.07
BRCA1-207ENST00000461798 JSRP1Q96MG2 331 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-207ENST00000461798 GNRHR2Q96P88 292 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 RHOXF2Q9BQY4 288 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 ITPAQ9BY32 194 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 PPCSQ9HAB8 311 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 SLC35C2Q9NQQ7 365 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 ALKBH4Q9NXW9 302 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 TAS2R7Q9NYW3 318 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 BCAP29Q9UHQ4 241 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 GRID1Q9ULK0 1009 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 PLLPQ9Y342 182 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 TIMM22Q9Y584 194 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 OTOGQ6ZRI0 2925 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 EML6Q6ZMW3 1958 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 CCDC168Q8NDH2 2452 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 ADGRG4Q8IZF6 3080 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 PHF3Q92576 2039 aaKnown RBP8.36□□□□□ -1.07
BRCA1-207ENST00000461798 A0A1W2PPM1 405 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 FRG2CA6NGY1 282 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 OR6C70A6NIJ9 312 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 CD8B2A6NJW9 211 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 MYO1GB0I1T2 1018 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 NPIPB8E9PQR5 432 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 PCDH7O60245 1069 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 PLOD3O60568 738 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 ICOSLGO75144 302 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 UGT2B11O75310 529 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 GLRA3O75311 464 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 CBR3O75828 277 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 TRAPPC6AO75865 159 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 LRATO95237 230 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 PROCP04070 461 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 CT45A8P0DMV1 189 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 CT45A9P0DMV2 189 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
BRCA1-207ENST00000461798 POU3F2P20265 443 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-207ENST00000461798 MPIP34949 423 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 CRHR1P34998 444 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 CCT5P48643 541 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 MASP1P48740 699 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 TRPC1P48995 793 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 ALDH9A1P49189 494 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 DLX5P56178 289 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 MRPS35P82673 323 aaKnown RBP8.36□□□□□ -1.07
BRCA1-207ENST00000461798 HMGCS1Q01581 520 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 PLCXD2Q0VAA5 305 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 TESK1Q15569 626 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 LTB4RQ15722 352 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 FBXL19-AS1Q494R0 122 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 CCDC153Q494R4 210 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 ACSF3Q4G176 576 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-207ENST00000461798 CT45A2Q5DJT8 189 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 POMZP3Q6PJE2 187 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 LACC1Q8IV20 430 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 PM20D2Q8IYS1 436 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 PRR22Q8IZ63 422 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 RDH11Q8TC12 318 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 RNF138Q8WVD3 245 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.36□□□□□ -1.07
BRCA1-207ENST00000461798 OMA1Q96E52 524 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 SLC35A4Q96G79 324 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 WDYHV1Q96HA8 205 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 VSTM2LQ96N03 204 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 BTBD9Q96Q07 612 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 NODALQ96S42 347 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 STMN4Q9H169 189 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-207ENST00000461798 MID1IP1Q9NPA3 183 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 ZNF629Q9UEG4 869 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-207ENST00000461798 TBK1Q9UHD2 729 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 EXO1Q9UQ84 846 aaKnown RBP8.36□□□□□ -1.07
BRCA1-207ENST00000461798 MRPS18CQ9Y3D5 142 aaKnown RBP8.36□□□□□ -1.07
BRCA1-207ENST00000461798 NINQ8N4C6 2090 aa8.36□□□□□ -1.07
BRCA1-207ENST00000461798 DCHS2Q6V1P9 2916 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 A0A087WV62 115 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 C15orf38-AP3S2A0A0A6YYH1 394 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 GNG14A0A1W2PPG7 69 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 PLOD2O00469 737 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 TSPAN2O60636 221 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 PLIN3O60664 434 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 SLITRK5O94991 958 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 ACTL6AO96019 429 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 ANXA4P09525 319 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-207ENST00000461798 IFI6P09912 130 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 MYL2P10916 166 aa8.35□□□□□ -1.07
BRCA1-207ENST00000461798 CPN1P15169 458 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms