RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 FLVCR1-AS1Q8TAF5 88 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 SSC4DQ8WTU2 575 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 BIRC7Q96CA5 298 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 ZNF689Q96CS4 500 aaPredicted RBP3.09□□□□□ -1.91
CLK1-206ENST00000461326 ZNF597Q96LX8 424 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 FAM173AQ9BQD7 235 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 ST6GALNAC5Q9BVH7 336 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 TRIM15Q9C019 465 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 LIME1Q9H400 295 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 AMBNQ9NP70 447 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 NRN1Q9NPD7 142 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 ABCC13Q9NSE7 274 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.09□□□□□ -1.91
CLK1-206ENST00000461326 KLRF1Q9NZS2 232 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 P2RX2Q9UBL9 471 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 ATP6V1HQ9UI12 483 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 FZR1Q9UM11 496 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 FOXJ3Q9UPW0 622 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 MOB4Q9Y3A3 225 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 FBXO7Q9Y3I1 522 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 CPQQ9Y646 472 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 FKBP7Q9Y680 259 aa3.09□□□□□ -1.91
CLK1-206ENST00000461326 MAGI1Q96QZ7 1491 aaPredicted RBP3.09□□□□□ -1.92
CLK1-206ENST00000461326 ADAMTS12P58397 1594 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 A0A1B0GWJ7 208 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 RNF222A6NCQ9 220 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 K7EPI3 171 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 PDLIM1O00151 329 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 CPLX1O14810 134 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 CHADO15335 359 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 TOXO94900 526 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 GUCA1CO95843 209 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 CALCBP10092 127 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 ZNF10P21506 573 aaPredicted RBP3.08□□□□□ -1.92
CLK1-206ENST00000461326 UCP1P25874 307 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 HTR2AP28223 471 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 PTPN4P29074 926 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 ADSSP30520 456 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 TRA2BP62995 288 aaKnown RBP3.08□□□□□ -1.92
CLK1-206ENST00000461326 SRYQ05066 204 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 ZP4Q12836 540 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 GLIPR1L2Q4G1C9 344 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 CYBRD1Q53TN4 286 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 LDLRAP1Q5SW96 308 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 LINC00242Q5T6M2 205 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 DMKNQ6E0U4 476 aaPredicted RBP3.08□□□□□ -1.92
CLK1-206ENST00000461326 ARMCX5Q6P1M9 558 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 NET1Q7Z628 596 aaPredicted RBP3.08□□□□□ -1.92
CLK1-206ENST00000461326 CEACAM19Q7Z692 300 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 TSEN54Q7Z6J9 526 aaKnown RBP3.08□□□□□ -1.92
CLK1-206ENST00000461326 ZNF440Q8IYI8 595 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 CENPSQ8N2Z9 138 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 ARFGAP2Q8N6H7 521 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 C4orf32Q8N8J7 132 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 RELL2Q8NC24 303 aaPredicted RBP3.08□□□□□ -1.92
CLK1-206ENST00000461326 SELENOMQ8WWX9 145 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 DLX4Q92988 240 aaPredicted RBP3.08□□□□□ -1.92
CLK1-206ENST00000461326 LHX4Q969G2 390 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 C18orf12Q96KH6 178 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 TSGA13Q96PP4 275 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 THUMPD2Q9BTF0 503 aaKnown RBP3.08□□□□□ -1.92
CLK1-206ENST00000461326 APOOQ9BUR5 198 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 TRIM9Q9C026 710 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 LRRCC1Q9C099 1032 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 EGLN1Q9GZT9 426 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 RIBC2Q9H4K1 309 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 ALG9Q9H6U8 611 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 LIN28AQ9H9Z2 209 aaKnown RBP3.08□□□□□ -1.92
CLK1-206ENST00000461326 TRPV5Q9NQA5 729 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 YAE1D1Q9NRH1 226 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 CENPMQ9NSP4 180 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 SLC35D1Q9NTN3 355 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 GDAP2Q9NXN4 497 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 MBD2Q9UBB5 411 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 GALPQ9UBC7 116 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 SH3BGRL2Q9UJC5 107 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 CHMP2BQ9UQN3 213 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 KLHDC2Q9Y2U9 406 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 ABCC4O15439 1325 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 COL2A1P02458 1487 aaPredicted RBP3.08□□□□□ -1.92
CLK1-206ENST00000461326 ERICH3Q5RHP9 1530 aa3.08□□□□□ -1.92
CLK1-206ENST00000461326 IGKV3D-15A0A087WSY6 115 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 IGHV3-16A0A0C4DH30 117 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 A0A0J9YVX5 310 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 TTC26A0AVF1 554 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 WASH3PC4AMC7 463 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 MCF2LO15068 1137 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 MAPK13O15264 365 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 PEX11AO75192 247 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 PDE5AO76074 875 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 ANP32DO95626 131 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 APBB3O95704 486 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 GOT2P00505 430 aaKnown RBP3.07□□□□□ -1.92
CLK1-206ENST00000461326 IFNB1P01574 187 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 HCKP08631 526 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 TRPC1P48995 793 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 ATP4BP51164 291 aa3.07□□□□□ -1.92
CLK1-206ENST00000461326 VCPP55072 806 aaKnown RBP3.07□□□□□ -1.92
CLK1-206ENST00000461326 MRPS6P82932 125 aaKnown RBP3.07□□□□□ -1.92
CLK1-206ENST00000461326 MS4A2Q01362 244 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms