RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 BICRALQ6AI39 1079 aa11.05□□□□□ -0.64
CPSF3-202ENST00000460593 REEP3Q6NUK4 255 aa11.05□□□□□ -0.64
CPSF3-202ENST00000460593 FAM26EQ8N5C1 309 aa11.05□□□□□ -0.64
CPSF3-202ENST00000460593 ARIH2OSQ8N7S6 290 aa11.05□□□□□ -0.64
CPSF3-202ENST00000460593 OR5D16Q8NGK9 328 aa11.05□□□□□ -0.64
CPSF3-202ENST00000460593 MYLIPQ8WY64 445 aa11.05□□□□□ -0.64
CPSF3-202ENST00000460593 KLK6Q92876 244 aa11.05□□□□□ -0.64
CPSF3-202ENST00000460593 TMEM38AQ9H6F2 299 aa11.05□□□□□ -0.64
CPSF3-202ENST00000460593 DLL4Q9NR61 685 aa11.05□□□□□ -0.64
CPSF3-202ENST00000460593 CUEDC1Q9NWM3 386 aaPredicted RBP11.05□□□□□ -0.64
CPSF3-202ENST00000460593 DNAH14Q0VDD8 3507 aa11.05□□□□□ -0.64
CPSF3-202ENST00000460593 SLC38A8A6NNN8 435 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 STK25O00506 426 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 GPR37L1O60883 481 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 B4GALT2O60909 372 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 IFNA14P01570 189 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 C8GP07360 202 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 OR56A5P0C7T3 313 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 SLC1A3P43003 542 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 DGCR2P98153 550 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 ZNF763Q0D2J5 394 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 SYPL1Q16563 259 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 CLLU1OSQ5K130 101 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 LIPJQ5W064 366 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 WASH2PQ6VEQ5 465 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 PRSS45Q7RTY3 260 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 SIAH3Q8IW03 269 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 C16orf78Q8WTQ4 265 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 NXPE2Q96DL1 559 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 TMEM175Q9BSA9 504 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 YIPF4Q9BSR8 244 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 QRSL1Q9H0R6 528 aaKnown RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 PTGFRNQ9P2B2 879 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 CFAP97Q9P2B7 532 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 RGS17Q9UGC6 210 aaPredicted RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 RASD1Q9Y272 281 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 PLXND1Q9Y4D7 1925 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 M0R233 179 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 XPAP23025 273 aaPredicted RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 ATP6V1E1P36543 226 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 HNMTP50135 292 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 KIAA1024LP59773 190 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 HSF2Q03933 536 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 ZNF155Q12901 538 aaPredicted RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 SLC30A6Q6NXT4 461 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 ATRAIDQ6UW56 229 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 GPALPP1Q8IXQ4 340 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 SRFBP1Q8NEF9 429 aaKnown RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 COQ8AQ8NI60 647 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 ORAI3Q9BRQ5 295 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 POLDIP3Q9BY77 421 aaKnown RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 SPRTNQ9H040 489 aaPredicted RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 EMC7Q9NPA0 242 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 TDP1Q9NUW8 608 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 SDHAF2Q9NX18 166 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 STOX2Q9P2F5 926 aaPredicted RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 CPNE7Q9UBL6 633 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 TRDV1A0A1B0GX56 115 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 G3V3Q6 166 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 FAAHO00519 579 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 PLATP00750 562 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 ACP2P11117 423 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 TSPAN5P62079 268 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 PTSQ03393 145 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 SLC25A35Q3KQZ1 300 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 ARHGAP15Q53QZ3 475 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 C3orf38Q5JPI3 329 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 SFRP4Q6FHJ7 346 aaPredicted RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 METTL2BQ6P1Q9 378 aaKnown RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 TAS1R1Q7RTX1 841 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 BBS10Q8TAM1 723 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 BRI3BPQ8WY22 251 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 CACNG6Q9BXT2 260 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 TTTY10Q9BZA0 68 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 GSX2Q9BZM3 304 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 BHLHE41Q9C0J9 482 aaPredicted RBP11.04□□□□□ -0.64
CPSF3-202ENST00000460593 OSGEPL1Q9H4B0 414 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 KLHL1Q9NR64 748 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 GULP1Q9UBP9 304 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 SEC14L3Q9UDX4 400 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 NDOR1Q9UHB4 597 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 A4GNTQ9UNA3 340 aa11.04□□□□□ -0.64
CPSF3-202ENST00000460593 TRPM7Q96QT4 1865 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 NPIPB8E9PQR5 432 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 GFYI3L273 518 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 ALDOBP05062 364 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 AHCYP23526 432 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 PDHA2P29803 388 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 ACLYP53396 1101 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 RTP2Q5QGT7 225 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 MZT2AQ6P582 158 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 ALKAL2Q6UX46 152 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 ADGRG3Q86Y34 549 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 OR8K5Q8NH50 307 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 WBP1Q96G27 269 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 TAS2R7Q9NYW3 318 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 A0A1W2PRG6 482 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 C7orf66A4D0T2 115 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 ZNF623O75123 536 aa11.03□□□□□ -0.64
CPSF3-202ENST00000460593 ATG13O75143 517 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms