RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 ZNF550Q7Z398 422 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 RASGEF1CQ8N431 466 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 CSNK1A1LQ8N752 337 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 FAM71DQ8N9W8 422 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 OR51Q1Q8NH59 317 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 RP9Q8TA86 221 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 MCOLN3Q8TDD5 553 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 SLC25A43Q8WUT9 341 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 NAT14Q8WUY8 206 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 HSPH1Q92598 858 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 PROX1Q92786 737 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 REXO5Q96IC2 774 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 PBKQ96KB5 322 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 PRR25Q96S07 402 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 SLC39A3Q9BRY0 314 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 CRACR2AQ9BSW2 395 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 FUZQ9BT04 418 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 SNRNP25Q9BV90 132 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 KRTAP3-1Q9BYR8 98 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 CCDC134Q9H6E4 229 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 CALHM2Q9HA72 323 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 PLEKHA2Q9HB19 425 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 ACKR4Q9NPB9 350 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 EHD3Q9NZN3 535 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 CWC15Q9P013 229 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 IKZF3Q9UKT9 509 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 PLAGL1Q9UM63 463 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 CAMK2AQ9UQM7 478 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 YARS2Q9Y2Z4 477 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 TCAF1Q9Y4C2 921 aa3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 MAGED1Q9Y5V3 778 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-211ENST00000460558 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TRBV11-1A0A0K0K1C0 115 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 SLC5A10A0PJK1 596 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 SAGE2PA6NJ88 616 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 SIGLEC16A6NMB1 481 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 H0YIG0 161 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 MPPED1O15442 326 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TMPRSS11DO60235 418 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ZNF354AO60765 605 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 FAM20BO75063 409 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 NXPH3O95157 252 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 P04436 131 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 HLA-DQB2P05538 268 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 FESP07332 822 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 CSF3P09919 207 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 DANCRP0C864 163 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 PNMA6AP0CW24 399 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TPBGLP0DKB5 382 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 APEHP13798 732 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 POU2F1P14859 743 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 PCMT1P22061 227 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 PTPN6P29350 595 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 FMO4P31512 558 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 CCKARP32238 428 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ME1P48163 572 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TRPC1P48995 793 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 DNASE1L1P49184 302 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 CLCN2P51788 898 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 GSCP56915 257 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 STX17P56962 302 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 CRYZQ08257 329 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 GALNT2Q10471 571 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 GAB1Q13480 694 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TP53BP2Q13625 1128 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 THOC5Q13769 683 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 GGTLC2Q14390 218 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 BECN1Q14457 450 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TBCCQ15814 346 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TYSND1Q2T9J0 566 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 HKDC1Q2TB90 917 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ADAM5Q6NVV9 412 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 C16orf54Q6UWD8 224 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 SCIMPQ6UWF3 145 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 IL20RBQ6UXL0 311 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 DEF8Q6ZN54 512 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 Q6ZPA2 131 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 RTL4Q6ZR62 310 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 USP43Q70EL4 1123 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 GPSM1Q86YR5 675 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 PSTKQ8IV42 348 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 FAM71AQ8IYT1 594 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 C2orf73Q8N5S3 287 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 LINC01555Q8NAE3 123 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 C9orf106Q8NAJ2 232 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 PLPP5Q8NEB5 264 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 OR52L2PQ8NGH6 319 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ZNF398Q8TD17 642 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 SMAP2Q8WU79 429 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 HEXDCQ8WVB3 486 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ASB10Q8WXI3 467 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 SYN2Q92777 582 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 RERGQ96A58 199 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ANKRD9Q96BM1 317 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 INTS12Q96CB8 462 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 R3HDM4Q96D70 268 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 PTCD3Q96EY7 689 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ADAD1Q96M93 576 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 MCEEQ96PE7 176 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms