RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SLC1A7O00341 560 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 TMEM225BP0DP42 221 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 LAMP1P11279 417 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 HOXD8P13378 290 aaPredicted RBP18.69■□□□□ 0.58
SNX27-204ENST00000458013 EVI2BP34910 448 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 PXNP49023 591 aaPredicted RBP18.69■□□□□ 0.58
SNX27-204ENST00000458013 HTR6P50406 440 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 MALLQ13021 153 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 PIP5KL1Q5T9C9 394 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 SLC35F2Q8IXU6 374 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 OR5AK2Q8NH90 309 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 SHISA4Q96DD7 197 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 FAXDC2Q96IV6 333 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 PDE7BQ9NP56 450 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 SGK494L7N484 410 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 NFKBIEO00221 500 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 GPR143P51810 404 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 CTXN1P60606 82 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 MLC1Q15049 377 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 SPHARQ15513 63 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 NSDHLQ15738 373 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 KCTD18Q6PI47 426 aaPredicted RBP18.69■□□□□ 0.58
SNX27-204ENST00000458013 CCBE1Q6UXH8 406 aaPredicted RBP18.69■□□□□ 0.58
SNX27-204ENST00000458013 LRP10Q7Z4F1 713 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 NAGSQ8N159 534 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 SULT4A1Q9BR01 284 aa18.69■□□□□ 0.58
SNX27-204ENST00000458013 CD79AP11912 226 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 PORP16435 677 aaPredicted RBP18.68■□□□□ 0.58
SNX27-204ENST00000458013 FECHP22830 423 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 FOXA1P55317 472 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 ERVPABLB-1P60509 514 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 GSG1LQ6UXU4 331 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 SDR9C7Q8NEX9 313 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 ZMYND19Q96E35 227 aaPredicted RBP18.68■□□□□ 0.58
SNX27-204ENST00000458013 FEVQ99581 238 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 TMEM184CQ9NVA4 438 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 AK6Q9Y3D8 172 aaKnown RBP18.68■□□□□ 0.58
SNX27-204ENST00000458013 DOK2O60496 412 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 NCR1O76036 304 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 NDUFV2P19404 249 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 RPL26P61254 145 aaKnown RBP18.68■□□□□ 0.58
SNX27-204ENST00000458013 SSX2Q16385 188 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 PCGF3Q3KNV8 242 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 DUS1LQ6P1R4 473 aaKnown RBP18.68■□□□□ 0.58
SNX27-204ENST00000458013 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNX27-204ENST00000458013 FBXO27Q8NI29 283 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 VDAC3Q9Y277 283 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 WDR37Q9Y2I8 494 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 ZNF175Q9Y473 711 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 MYH8P13535 1937 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 C1orf226A1L170 272 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 HTR1EP28566 365 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 ART1P52961 327 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 NTHL1P78549 312 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 MFSD6LQ8IWD5 586 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 OR5B12Q96R08 314 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 NKX2-4Q9H2Z4 354 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 POPDC3Q9HBV1 291 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 TCHHQ07283 1943 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 HRGP04196 525 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 MPC1LP0DKB6 136 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 PNMTP11086 282 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 NR2C1P13056 603 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 RHCEP18577 417 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 CAPN3P20807 821 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 GABRR1P24046 479 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 LILRB2Q8N423 598 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 LMNTD1Q8N9Z9 388 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 OR5AR1Q8NGP9 310 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 OR4K3Q96R72 315 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 KATNBL1Q9H079 304 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 ABCG5Q9H222 651 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 UCHL1P09936 223 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 AKR1C2P52895 323 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 INCA1Q0VD86 236 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 P2RY14Q15391 338 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 SLC5A8Q8N695 610 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 DCUN1D4Q92564 292 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 SMIM3Q9BZL3 60 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 IRS2Q9Y4H2 1338 aa18.68■□□□□ 0.58
SNX27-204ENST00000458013 TP53I11O14683 189 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 STC2O76061 302 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 UGT2B10P36537 528 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 TAS2R38P59533 333 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 ZNF423Q2M1K9 1284 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 C2orf42Q9NWW7 574 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 PITPNBP48739 271 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 KLHDC8AQ8IYD2 350 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 OR5H2Q8NGV7 314 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 RBM24Q9BX46 236 aaKnown RBP18.67■□□□□ 0.58
SNX27-204ENST00000458013 HAPLN2Q9GZV7 340 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 TRAV18A0A075B6X5 111 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 H0YAE9 185 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 NUDT21O43809 227 aaKnown RBP18.67■□□□□ 0.58
SNX27-204ENST00000458013 DUX1O43812 170 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 CSNK2A1P68400 391 aaPredicted RBP18.67■□□□□ 0.58
SNX27-204ENST00000458013 RAB30Q15771 203 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 ANKRD54Q6NXT1 300 aa18.67■□□□□ 0.58
SNX27-204ENST00000458013 CSNK2A3Q8NEV1 391 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms