RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ACOX3O15254 700 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 FRS3O43559 492 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 PLOD3O60568 738 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 ZNF354AO60765 605 aaPredicted RBP8.12□□□□□ -1.11
RIF1-208ENST00000457745 ALOX12BO75342 701 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 PGM3O95394 542 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 UMODP07911 640 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 CELA2AP08217 269 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 PPIBP23284 216 aaKnown RBP8.12□□□□□ -1.11
RIF1-208ENST00000457745 TLX1P31314 330 aaPredicted RBP8.12□□□□□ -1.11
RIF1-208ENST00000457745 CSTF2P33240 577 aaKnown RBP eCLIP8.12□□□□□ -1.11
RIF1-208ENST00000457745 MPIP34949 423 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 KHKP50053 298 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 ST13P50502 369 aaKnown RBP8.12□□□□□ -1.11
RIF1-208ENST00000457745 PGDP52209 483 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 MAPK10P53779 464 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 ARSFP54793 590 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 HSD17B7P56937 341 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 RPS18P62269 152 aaKnown RBP8.12□□□□□ -1.11
RIF1-208ENST00000457745 PSG6Q00889 435 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 CHRNEQ04844 493 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 VAC14Q08AM6 782 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 LRRC74AQ0VAA2 488 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 FUT7Q11130 342 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 MAP4K2Q12851 820 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 TRA2AQ13595 282 aaKnown RBP eCLIP8.12□□□□□ -1.11
RIF1-208ENST00000457745 PUM1Q14671 1186 aaKnown RBP eCLIP8.12□□□□□ -1.11
RIF1-208ENST00000457745 MAPK14Q16539 360 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.12□□□□□ -1.11
RIF1-208ENST00000457745 TBCELQ5QJ74 424 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 OGFRL1Q5TC84 451 aaPredicted RBP8.12□□□□□ -1.11
RIF1-208ENST00000457745 HEPHL1Q6MZM0 1159 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 CDC73Q6P1J9 531 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 MRPL14Q6P1L8 145 aaKnown RBP8.12□□□□□ -1.11
RIF1-208ENST00000457745 FRRS1Q6ZNA5 592 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 LRRC74BQ6ZQY2 392 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 CCDC80Q76M96 950 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 PPP1R3BQ86XI6 285 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 PROSER1Q86XN7 944 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 ST13P4Q8IZP2 240 aaPredicted RBP8.12□□□□□ -1.11
RIF1-208ENST00000457745 VWA5B2Q8N398 1253 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 NATD1Q8N6N6 113 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 TRIML2Q8N7C3 387 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 OR52E4Q8NGH9 312 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 ZNF721Q8TF20 911 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 STMN2Q93045 179 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 C8orf44Q96CB5 159 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 CLIP3Q96DZ5 547 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 MVB12AQ96EY5 273 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 SLC47A1Q96FL8 570 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 C7orf34Q96L11 122 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 LRGUKQ96M69 825 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 VSTM2LQ96N03 204 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 CNPPD1Q9BV87 410 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 CHID1Q9BWS9 393 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 NRSN2Q9GZP1 204 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 LIN28AQ9H9Z2 209 aaKnown RBP8.12□□□□□ -1.11
RIF1-208ENST00000457745 FANCEQ9HB96 536 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 PNO1Q9NRX1 252 aaKnown RBP8.12□□□□□ -1.11
RIF1-208ENST00000457745 AGPAT4Q9NRZ5 378 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 SEMA3GQ9NS98 782 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 ARMC1Q9NVT9 282 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 SLC39A1Q9NY26 324 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 NTNG1Q9Y2I2 539 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 HRH3Q9Y5N1 445 aa8.12□□□□□ -1.11
RIF1-208ENST00000457745 A0A087WV62 115 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 C17orf105B2RV13 164 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 B4E171 279 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 J3KTA2 159 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 PDLIM1O00151 329 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 MEN1O00255 615 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 SOCS2O14508 198 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 POLR1CO15160 346 aaPredicted RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 SLC28A2O43868 658 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 OR10H2O60403 315 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 LRP3O75074 770 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 PRSS23O95084 383 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 MFN2O95140 757 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 H6PDO95479 791 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 DLGAP3O95886 979 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 IGKV3-11P04433 115 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 GPIP06744 558 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 ZGLP1P0C6A0 271 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 FTH1P19P0C7X4 201 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 F8A1P23610 371 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 GCKP35557 465 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 TSPAN7P41732 249 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 MAGEA2P43356 314 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 YAP1P46937 504 aaKnown RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 OR1E2P47887 323 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 GPR143P51810 404 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 AP2B1P63010 937 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 PRR20EP86478 221 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 PRR20CP86479 221 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 PRR20DP86480 221 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 PRR20BP86481 221 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 PRR20AP86496 221 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 STX4Q12846 297 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 ZNF155Q12901 538 aaPredicted RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 VEZF1Q14119 521 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms