RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 APOL2Q9BQE5 337 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 EBF4Q9BQW3 602 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 SLC30A2Q9BRI3 323 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 ZNF2Q9BSG1 426 aaPredicted RBP6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 PCGF1Q9BSM1 259 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 FICDQ9BVA6 458 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 GGACTQ9BVM4 153 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 SMG9Q9H0W8 520 aaKnown RBP6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 DCSTAMPQ9H295 470 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 C12orf65Q9H3J6 166 aaKnown RBP6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 SLC28A3Q9HAS3 691 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 PDE7BQ9NP56 450 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 ADAP2Q9NPF8 381 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 DYRK4Q9NR20 520 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 TAS2R3Q9NYW6 316 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 USE1Q9NZ43 259 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 UBP1Q9NZI7 540 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 LHX3Q9UBR4 397 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 PDE10AQ9Y233 779 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 BPTFQ12830 3046 aa6.47□□□□□ -1.37
CUBNP3-201ENST00000457461 A0A1W2PPM1 405 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 XKRY2A2RUG3 117 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 BTBD17A6NE02 478 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 CXorf49A8MYA2 514 aaPredicted RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 PRR23D1E9PI22 279 aaPredicted RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 TEX46H3BTG2 121 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 CYR61O00622 381 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 DVL2O14641 736 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 DLEU1O43261 78 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 TMEM127O75204 238 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 H2AFYO75367 372 aaKnown RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 GATBO75879 557 aaKnown RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 HLA-DQB1P01920 261 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 CSF2P04141 144 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 PGRP06401 933 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 GPIP06744 558 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 METTL15P1P0C7V9 234 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 PRR23D2P0DMB1 279 aaPredicted RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 HIST1H1BP16401 226 aaKnown RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 HLA-DPA1P20036 260 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 PVALBP20472 110 aaPredicted RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 HNF1AP20823 631 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 UQCRC2P22695 453 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 RPS3P23396 243 aaKnown RBP eCLIP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 S100A11P31949 105 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 MAP3K8P41279 467 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 ACAA2P42765 397 aaKnown RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 RPS9P46781 194 aaKnown RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 RGRP47804 291 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 GCGRP47871 477 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 FHITP49789 147 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 XKP51811 444 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 CEBPGP53567 150 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 MRPS11P82912 194 aaKnown RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 TNFRSF9Q07011 255 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 CDH18Q13634 790 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 KRT33BQ14525 404 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 GANABQ14697 944 aaKnown RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 TAF1AQ15573 450 aaPredicted RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 TATDN3Q17R31 274 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 PCID2Q5JVF3 399 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 C6orf141Q5SZD1 244 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 CERCAMQ5T4B2 595 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 JMJD6Q6NYC1 403 aaPredicted RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 SPNS3Q6ZMD2 512 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 C17orf107Q6ZR85 190 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 USP30Q70CQ3 517 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 GPR149Q86SP6 731 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 SLC26A11Q86WA9 606 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 TGIF2LXQ8IUE1 241 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 NAXDQ8IW45 347 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 CNTN4Q8IWV2 1026 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 NPAS3Q8IXF0 933 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 CBR4Q8N4T8 237 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 OR2T4Q8NH00 348 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 PHOSPHO1Q8TCT1 267 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 FAR1Q8WVX9 515 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 ADAMTS14Q8WXS8 1223 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 CORO2AQ92828 525 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 VOPP1Q96AW1 172 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 SLCO4A1Q96BD0 722 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 TIFAQ96CG3 184 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 CERS2Q96G23 380 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 BSCL2Q96G97 398 aaPredicted RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 SHDQ96IW2 340 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 LRRC3BQ96PB8 259 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 TEFMQ96QE5 360 aaKnown RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 SEMA3CQ99985 751 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 MAPKAP1Q9BPZ7 522 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 MARVELD1Q9BSK0 173 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 NSUN3Q9H649 340 aaKnown RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 NOL11Q9H8H0 719 aaKnown RBP6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 SPHK2Q9NRA0 654 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 RXFP3Q9NSD7 469 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 TREX1Q9NSU2 369 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 ZSCAN32Q9NX65 697 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 OBP2AQ9NY56 170 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 KCMF1Q9P0J7 381 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 SEC14L3Q9UDX4 400 aa6.46□□□□□ -1.37
CUBNP3-201ENST00000457461 SERGEFQ9UGK8 458 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms